Fragilariopsis cylindrus: FRACYDRAFT_181471
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Entry
FRACYDRAFT_181471 CDS
T04784
Name
(GenBank) Wyosine_form-domain-containing protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_181471
Enzymes [BR:
fcy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
FRACYDRAFT_181471
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
FRACYDRAFT_181471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
Wyosine_form
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
OEU20912
JGI:
181471
UniProt:
A0A1E7FRV9
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MKSLKSKEPMEMVTATQAKALQKEGYKLIGTHSAVKLCRWTKHQLRGRGGCYKHTFYGIT
SYQCMEATPSLACANKCVFCWRHHKNPVGKEWRWKTDDPYFIVDEAVKAHIKLIKETKGI
PGVNMERWKEAHTVRHCALSLVGEPIMYPRINEFLGDLHKRNISTYLVTNGQHPAQIDSL
IPITQLYVSIDAPTPESLIAIDRPLFSDAWDRLKDSLTFLKDKGQRTVARLTVVKGWNSD
EIGGYAKLIALGKVSLIEVKGVTFCGKSDASNLNMSNTPWHHEVIDLCRNLKMELDRMRE
EGGPDAPPEYDLCCEHRHSVSVLLARVDQFSVKDQDGRRVWKTWIDYPKFQELAAAHAKD
PSATYKVEDYTAETPAWALFGSEEEGFDPIDKRHRRKQKHPKYTQYDHRGVPTHDDNNEK
LSSEEYRRLNTRMDEKLKQVGCGSTVTALKGGERVIDNASLMFRGDTIIK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgttgaagtcgaaggaaccaatggaaatggtaacagctacacaagccaaggcc
ttgcagaaggaaggatacaagttgattgggacgcacagcgcagtcaaattgtgtcgctgg
actaagcatcaactaagaggacggggtggctgctataaacataccttctacggtatcact
tcctaccaatgtatggaggcaactccaagtctagcgtgtgctaacaaatgtgtcttttgc
tggaggcaccacaaaaaccccgtgggtaaagaatggcgatggaagactgatgatccatac
ttcattgtggatgaggctgtcaaggcacacatcaaattaattaaggagacaaagggaatt
cctggagtaaatatggaacgatggaaagaggctcacactgttagacattgcgctctttca
cttgttggtgagccaattatgtaccctcgaattaatgaatttttgggcgatttgcataag
cgtaacatttctacctacttggtaaccaatgggcagcaccccgcacagatcgattctttg
attccaattacacaattgtatgtaagtatagacgcgccaacgccagaaagtctaattgcc
attgatcgacctcttttttcggatgcttgggatcgtcttaaagattcattgacgttcctg
aaagataaaggacaacgaacagttgcccgactgactgttgtaaagggctggaattcagat
gaaatcggaggatacgccaagttaattgccctgggtaaagtgtcgttaattgaagtcaag
ggtgtcacattttgtggaaaatcggatgcttccaatttaaacatgtccaatacaccatgg
catcacgaagtaattgacttatgccgtaatctgaagatggagctagaccgaatgcgagag
gaaggtggaccagatgcccctccagagtatgatctttgctgcgagcacagacattccgtg
agtgtccttctggcacgtgtcgatcaattttctgtgaaagatcaagacggtagacgcgtg
tggaaaacatggattgactacccgaaattccaagaactagcagctgcacatgccaaggac
ccttctgctacctataaagtagaggattacacggcagaaactccggcttgggcactcttt
ggatcggaagaagaaggctttgatcctattgacaaacgccatagaaggaagcaaaagcat
ccaaaatacacccaatatgaccacaggggagtccccactcacgatgacaacaatgaaaag
ctgagttcagaggagtatcgtagattgaataccaggatggatgagaaactcaaacaggtc
ggttgcggatcaaccgtgacggcgttaaaaggaggtgaaagggtaattgataatgcttcg
cttatgttccgcggggacactattattaaatag
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