Fragilariopsis cylindrus: FRACYDRAFT_187472
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Entry
FRACYDRAFT_187472 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
FRACYDRAFT_187472
Enzymes [BR:
fcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FRACYDRAFT_187472
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_19
ATPase
ResIII
nSTAND3
HA2_N
AAA_22
AAA_30
NACHT
PhoH
Motif
Other DBs
NCBI-ProteinID:
OEU15996
JGI:
187472
UniProt:
A0A1E7FCY6
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MGDQRRGLPVYNFKDALLKTIANNRVTVVEGETGSGKTTQVPQFCLEDAASKGIACNIII
AQPRRISAMSVAERVAAERGETIGKTVGYTIRLESKATPNTRLLFCTTGILLKRLEEDPT
LNNVTHVFVDEVHERSIESDFLLMVLRDMLPKRTTDRPLKVVLMSATLDASLFHDYFWGA
PSVKFPGRTFPVTELYLEDALEVTGHVVKGNEDWCKKGGSGGQKVVPLEDRDDMELTQQE
LTARYTQYSSNTQAALSKLDHNAIDYDLVVDTIQWLCNLNTGGDSKIDTTSSAILVFLPG
IKEITTLQELLVKSTSSQAAREWILPIHSTIPPEEQRLVFTRPPKGIRKVVLATNIAETA
ITIDDVAFVVDTGRMKENRYDPLKRMSSLEDCLVARSNARQRRGRAGRVREGVAVHLFTK
HRHEKITMAAQAPEVQRVPLEQLVLRIKALQYPGTAAEVCARLVEPPAPQAVERAVEELV
FLEAMTISKSSKKEELTTLGVHLSTLPVDCRIGKLILLGAMFGVTDDALTIAATLSYRNP
FMSPISAREEADRAKMTFATAQSDHLTVLNAYKQVDAMGKSRYDFCRENFLSIKTIQTIA
GLKRQFLELLSAAGFVRPNLRNDENEFEKSLPLLKALLVAALFPQIVIVDDGKSSSGKKG
GGGGMTLKARVEDGEKQEEMALHPSCITGKAKGALSSKYLVYHERVKTTRVYIRDATPVS
PYALILFGGGRMEVEACPRGSTESVLRLDGWLGFKCPRRDHLLVMELREVLDGILKHKVE
NPKIDFSEEGAGIIDAV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccaacgccgcggtctaccggtgtacaattttaaagatgcactattgaaaact
attgccaataatagagttaccgttgtcgaaggagaaacgggatcgggaaaaacaacacaa
gtcccccaattttgtctggaagatgctgcatccaaaggcatcgcgtgcaatattatcatc
gcacaaccacgacgaatttcggccatgtcggtggcagaacgagttgctgccgaacgtggt
gagacgattggcaagacagtcggatatacaattcgtttagaatcaaaagcaacacccaac
acaagactcttattttgtacgacagggatattgttgaaacgcttggaagaggatccgacc
ctcaataatgtcacgcacgtctttgttgacgaagtccacgaacgatctattgaaagtgat
tttttgctcatggtacttcgagatatgttgcccaaacgaaccaccgataggccactcaag
gttgtcttaatgtcggccacactcgatgcttcgctatttcacgattatttttggggtgcg
cctagtgtgaaatttccaggacgaacatttcccgtcacagaattgtatttggaagatgcg
cttgaagtgacggggcatgttgtgaaaggcaatgaagattggtgtaaaaaaggtggtagt
ggtggtcaaaaagtcgtcccgttggaggatcgcgacgatatggaattgactcaacaagaa
ttgacggctcgctacacacagtactcgtccaatacacaagcggcactcagcaaactcgat
cacaacgccattgattatgatcttgtcgttgataccattcagtggttgtgtaatttaaat
actggtggtgattccaagatagatactacatcatctgccattttggtctttcttcccgga
ataaaggagattacaacgcttcaagaactactcgtcaaatccacatcgtcacaggccgca
cgtgaatggattttgcccattcattcgactattccccccgaagaacaacgccttgtcttt
acccgccctcccaaaggaattcgcaaagtagtattggcgacgaatattgcggaaacagcc
attaccattgatgatgttgcctttgtggtggatacgggtcgcatgaaagagaatcggtac
gatccactcaagcgcatgtcgtctctggaagattgtttggtggcgcggtccaatgctcga
caacgtcgtggtcgtgcgggtcgtgttcgggagggagtagcggttcatttgtttaccaaa
catcgacacgagaaaattaccatggcagcgcaggcacccgaggtgcaacgagtgcctctg
gagcaactcgtgttgaggatcaaggcacttcaatatcctggaacagcagccgaagtgtgt
gctcgcttggtggaaccaccggctcctcaagcagtagagagagctgtggaggaattggta
tttttggaggccatgacaattagcaagagcagcaagaaagaggaactgaccaccttaggt
gttcatctttcaacgctgcccgtcgattgtagaattgggaaacttattcttttgggagcc
atgtttggtgtcactgacgatgctttgaccattgcggcaacgctttcgtatcgtaaccct
ttcatgtcacccatatcagcacgagaagaggcggatcgtgccaaaatgacctttgcgaca
gcgcaatccgatcacttgaccgttctaaatgcgtacaagcaggtggatgcgatgggaaaa
tcgagatatgatttttgccgagagaactttctcagcatcaaaacgatccagacaattgca
ggtttgaagaggcagtttttagaactgctgtctgcggcaggattcgttcgtcccaacttg
agaaacgacgaaaatgaattcgaaaagtcgcttccgttgttaaaggcactactggttgct
gctttgttcccgcaaatagtcattgtcgatgatggcaaaagctctagcggaaagaaaggt
ggtggtggaggaatgaccctgaaagctagggtggaagatggggagaaacaggaggaaatg
gcgctccatccaagctgtattacggggaaggcaaagggtgctctgtcttctaaatacttg
gtgtatcatgaaagggtcaagacaacgagggtttatatacgagatgctacaccagttagt
ccatatgcattgattctattcggcggaggaaggatggaagttgaggcttgtccaagaggc
agcactgaaagcgtcttgcgactggatgggtggcttggattcaagtgtcctcgacgcgat
catctattggttatggaattgagggaagtgctggatggaattttaaagcataaggtagag
aatccaaagatagatttctccgaagaaggagccggtatcattgacgcagtg
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