Fragilariopsis cylindrus: FRACYDRAFT_208331
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Entry
FRACYDRAFT_208331 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
FRACYDRAFT_208331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_208331
Membrane trafficking [BR:
fcy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
FRACYDRAFT_208331
Hops complex
FRACYDRAFT_208331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Motif
Other DBs
NCBI-ProteinID:
OEU16540
JGI:
208331
UniProt:
A0A1E7FEF7
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MSIFVAYHRQKRALRNSTAGASLSTRTTAGVSCYDIPLPQGAYPTPVSAPSARHDLDGRN
CTSSSLCDAVTSGKGNELYLCVARPDGLYTYSTTQKVDVSPIDGSKLAICLVPPPKSAGT
SREPANVSGKTGSGFVLVASTDSKSRRDAVDLYDPYNKLVAFHLLLSPGHTAIRAAGVTT
LPTRCADGSLQSGRSSAVIFTSGGSLVTLTEKDTSEKVNLLVQKNLYSAAIFVAYSDPSY
ETEDITLLYRRHAEYLYRKGEYGGAIEQYINTIGSLEPSHVIFRYLDAPKIPLLVKYLEE
LRSQDLTTPVHNELLRTCYLKLNDAESAEAIAAFSSRSMDSESLSTMVAKSPKDALATIC
SFDAPEAAEALAVYGATLARLLSRETAGLVVALCLGTFSPRKLSESQATIMADSKKFLEQ
PVDDRERACEAYPVHIFASAFMENPKILRLILTHCNRNKCHLGPSLRRTLLELTLAEWNQ
AKRTGDMEAEKMRRKEAIAALTDSHSRDIGDYDALVIVQLAGFEEGELLLYERLQMGPML
LSRYAKDGSEKARRQMLAMCQTDPEVSADVLGYFVNMVTERLADSEHDNVDDDGEESDDE
VNDILEDIQETLALARSQGVLPPVRIARILAGEGTGQFSSAVIPSDRVQSRTVPLSVALD
YVGDILDESRKEISRLKVEVEEYNQLCNAMEAQIDSLLNIPQTPNSPEDTSKQIKPRIDI
EDMYSKIRMAVDEGERLDNKAELSREAFWREMDQSEDNFQTIARFFTKNVIQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagcatctttgttgcataccatagacagaaaagggccttgcggaatagcacagctggt
gcttctttgtcaacgcggacaactgcaggagtgagctgttatgacataccgttgccacaa
ggagcctatccaacacctgtttcggccccctctgcacgacacgaccttgatggtcgaaat
tgcacgtcatccagcttatgtgatgctgtaactagtggaaaaggcaacgaattgtaccta
tgtgtagcccgacccgatggtttgtacacctactcaacgactcaaaaggtagatgtctcc
ccaatcgacggaagtaagttggctatctgcttggtaccacctccgaaatcagcaggaaca
tcccgagaaccggctaatgtttcaggtaagactggttcaggatttgttctagttgcatcg
actgatagcaaatcgcgaagagatgctgttgatttatacgatccatacaataagcttgtc
gcgttccatttattgctgagtccaggtcatacagctatacgtgctgcaggggtgactaca
cttcccacacgatgtgcagatggaagtttacaaagtggtcgatcttctgctgttatattt
acgtcaggaggttcactggtgacattgacggaaaaggacacgtcagaaaaggtgaatctt
ttggtgcaaaaaaacttatactccgcagctatatttgtagcatattctgatccatcatac
gagactgaagacattacacttctttatcgccgccatgctgaatatttgtatcgaaaaggc
gaatacggtggtgccattgaacaatatattaacaccattggatctctcgagccatctcac
gttatctttcgatatctagatgcaccgaaaattcctctcttagtaaaataccttgaggaa
cttcgatcacaagacttgacgacaccagtacacaatgaattgcttcggacgtgttacctc
aagttgaatgatgcggaatcggctgaagctattgctgcattttcgtctcgttcgatggat
tccgaatcactatcgactatggttgccaagtctccgaaggacgctctggcaacgatttgt
tcgtttgatgccccggaagctgctgaagcacttgctgtttatggagcgactttagctcgt
ctgctttcaagagaaacggcaggattagtagtggcactatgtctcggaaccttttcaccc
cgaaaattatctgagtcacaagccactataatggcagattccaagaaatttctggaacaa
ccagtcgatgaccgtgaacgtgcctgtgaagcataccccgtccacatttttgcttcggcc
tttatggaaaatccaaagatactacgacttattctgactcattgcaatagaaacaaatgc
catctaggtccctctctgcgaaggactcttctcgaattgacgctggcggaatggaatcaa
gcaaagcggacgggcgatatggaagcggaaaaaatgagaaggaaagaagccattgctgct
cttactgactcacatagtagagacattggagactatgatgccttggtgattgtacagcta
gcaggttttgaagaaggagaactactgttgtatgaacgactacaaatgggcccaatgctt
ctctcgcggtatgcgaaagacggcagcgaaaaggcacggagacagatgctggctatgtgc
caaactgatcctgaagtttcagcggatgttctaggctattttgtgaatatggtgacggag
aggctggcagattctgaacatgataatgtagacgacgatggagaagaatctgatgacgaa
gtcaatgatattttagaggatatacaagagactcttgctctggcacgtagccagggagtt
ctcccgccggtcagaatcgctcgtattctcgctggtgagggtacgggacaattcagtagt
gctgtaattccttcagatcgagtccaatcaaggacagtaccgttatcagtagcgctcgat
tatgttggagacatcttagatgaatcgcggaaagaaatctcgcgcttgaaggttgaagta
gaagaatacaatcaactctgcaatgcaatggaagctcagatagattcacttctgaatatt
ccgcagacgcctaattctcctgaagatacgagcaaacaaataaagccaagaatcgacatt
gaagatatgtactcaaagatacgcatggccgtggacgaaggagaaagactcgataataag
gctgagctatcccgtgaggcattctggagagagatggatcaaagtgaggacaattttcaa
acaattgcaagattcttcactaaaaatgtaatccaatag
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