Fragilariopsis cylindrus: FRACYDRAFT_232641
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Entry
FRACYDRAFT_232641 CDS
T04784
Name
(GenBank) DUF544-domain-containing protein
KO
K01309
ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:
3.4.19.12
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_232641
Enzymes [BR:
fcy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
FRACYDRAFT_232641
Ubiquitin system [BR:
fcy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
FRACYDRAFT_232641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY_DUB
Motif
Other DBs
NCBI-ProteinID:
OEU22484
JGI:
232641
UniProt:
A0A1E7FWI3
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAYRLKKIQYKNQSYYILLQNENGPCPLLAAGNVLLLKKSIALPSNCIGSGVVTIEELTN
LLAEKILINSDSTTGSSDYHINEVMKIFPNLQFGMDVNPKFTAGPTGVEYTMELNAFDLL
HVELVHGWLLESDAQEYEWVGGKTYNQLVNVVIEGNDASTKLQQNPQGEDYDELSNQATR
GTVVRNFLDGSAHQLTQYGLTVLHEYVKEGDMKIFFRNNHYNTLTKFKDNLYLLVTDFGY
ADVPSVIWEKLDVIDGDTEYVNGEFQVLAPSAHHVDEAATGGHLVANNMQSQADYQLALQ
LSREATTDTDTDTTTTATDATNIQREDSDIERAKKASLLEHECQQQEQPVSQKRPSSSTG
DLPTFPTIAVGIPASHLSQEDRDMMLAKQLQRQEEKQQQELSRQQRQRQQQLRQSTTVQP
RSKAATKDSSCIIS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcgactgaagaaaatccagtataagaaccaaagttattatatacttcttcag
aatgaaaatggaccgtgtccactgcttgcagcagggaatgttctgttactaaagaaatcg
attgcgctaccctccaattgcatcggatctggtgtcgtgactattgaggagctgacgaat
ctgttggcggaaaaaatactgattaacagtgattccacgacaggtagcagcgactaccac
attaatgaagtgatgaaaatatttcccaatttacaatttggaatggacgttaatccaaaa
tttacggctggtccaacgggtgtagaatataccatggaattaaatgcatttgatcttctt
cacgttgaactagttcatgggtggttactagaatcagatgctcaagaatacgagtgggta
ggtggtaaaacatacaatcaacttgtcaatgtagtcatcgaaggtaatgatgcaagtacg
aaactccaacaaaatccacaaggagaagattacgatgaactatctaaccaagcgactcgt
ggtaccgtcgttcgcaattttttagatgggtccgctcatcaactgacacaatacggattg
actgtcttgcatgaatatgttaaggaaggggacatgaaaattttcttccggaataatcat
tataacacgttaactaaattcaaagataatttgtatttacttgtcacagatttcggttac
gctgacgtccctagtgttatttgggaaaaacttgatgtcatagatggtgatactgaatat
gtgaatggagaatttcaagtcctagcacccagtgcacatcacgttgatgaagctgcaacg
ggaggacacctcgtagccaataatatgcaatctcaggcagattatcagttagcactacaa
cttagtcgggaagctactactgatactgatactgatactactacaactgcgactgatgcc
accaatatacagcgggaagactctgatatagaacgagcaaaaaaagctagtcttttggaa
catgagtgtcaacaacaagaacaaccagtgtcacaaaagcgtccttcttcttctacaggt
gatcttcctacttttccgactattgctgttggaatccccgcatcgcacctttcacaagaa
gacagggacatgatgctagccaagcagctacagcgccaagaagaaaaacagcaacaagaa
ttatcacgacaacaacgacaacgacaacagcagcttcgtcaatcgacgacagttcagccg
cgaagcaaagcagccacaaaagactccagttgcatcatatcatag
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