Fragilariopsis cylindrus: FRACYDRAFT_238614
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Entry
FRACYDRAFT_238614 CDS
T04784
Name
(GenBank) S-adenosyl-L-methionine-dependent methyltransferase
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_238614
Enzymes [BR:
fcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
FRACYDRAFT_238614
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
FRACYDRAFT_238614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PrmA
Methyltransf_11
Methyltransf_15
MTS
Cons_hypoth95
Myc_N
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
OEU16030
JGI:
238614
UniProt:
A0A1E7FCY7
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MYRKQQQWIRPQRQLYQHQYCKSSTSSALESSSTKQIIIPDTTTMIDIGQPPVFEIPKAF
VTKPFDYHQQIIIEIESLTNMGWGIGRVSLKEQSNIIDTNDNKNEEEDDDEEEEEEERLW
VIMVPHVLVGETVKVSIFRNMKGHSEADLIEVITSSPERVEPKCPLAGICGGCQYQHMSI
KAQREWKTKHVEEVLLQQDITNYNTTEQLLVLSKPAAGTDEVYGYRSKITPHYQAPSDNF
DGTYAMKEIGFQKSSNRNLVDVPECPIAMPAINEKYKEARGRLVDEAHRGLLNQVDPKKK
KKRKRRGSKNNGGGKGATLLFRQADDEVEEDDDGISSTSPLVVTDHNQYMTTTIKNLRFR
YLAGNFFQNNNYVVPLMVDAVVEAAIMPVINNIIDGNNKKSPSYLIDCYCGSGLFALSAA
SHFDLCVGIEVNPKAIEEATANAVSNDISNCQFMAASAEAIFTSPPEITISGFEQQRVQT
FPREETVVIVDPPRKGCSEEFLNQLYDYSPQRIVYMSCGPATQARDAKGIVEIGGYEITS
IQPFDLFPQTKHIESLIVFEKISS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtataggaaacagcaacaatggatccgaccccaacgtcaattataccaacatcaatac
tgcaagtcgtcgacgtcatcagcattggagtcgtcatcgactaaacaaataataatacca
gatacaacgacgatgattgacattggacaaccacctgtcttcgagatcccgaaagcattc
gttacgaaaccatttgattatcaccaacaaataattatagaaattgaatcacttacaaat
atgggatggggaattggaagagtgtcattaaaagaacaaagcaatattatcgatacgaat
gacaataagaatgaagaagaagacgacgacgaagaagaagaagaagaagaacgattatgg
gtgattatggtcccacatgtattagttggggaaactgttaaggttagtatattccgtaat
atgaaaggtcatagtgaagctgatttgattgaggttattacatcaagtccagaacgtgtt
gaaccgaaatgtccattagcaggaatatgtggtggatgtcaataccagcatatgtcaatc
aaggcacaaagggaatggaaaacaaaacacgtcgaggaagttctgttgcaacaagatatc
acaaattataatacaacagaacaattattagttctatcgaaaccagcagcaggaacagac
gaagtgtatggatatcgatctaaaattacaccacattatcaggcaccaagtgataatttt
gatggtacatacgctatgaaagaaattgggtttcaaaaatcatcgaatcgtaatcttgtg
gatgtacccgaatgtcctattgctatgcctgctataaatgaaaaatataaagaagctcga
ggaagattagtcgatgaggcacatcgtggtttgttgaatcaagttgatccaaaaaagaag
aaaaaacgtaaaagacgtggtagtaagaataatggtggtggaaagggtgcaacactttta
ttccgtcaagcggatgacgaagtcgaagaagacgatgatggtatttcttctacttcccct
ctggtagtaactgatcataatcaatatatgaccacaactatcaaaaatttaagattccga
tacctcgctggaaacttctttcaaaacaataattatgttgttccacttatggtcgatgca
gtcgttgaggctgcgataatgcccgttatcaataatatcatagacggcaacaacaagaaa
tctccttcatacttaattgattgttattgtggatcaggtctctttgctttaagtgccgca
tcgcatttcgatttatgtgttggaattgaagtcaatccaaaggcaattgaggaagcaaca
gcgaatgctgtatcgaatgatatatcaaattgccaatttatggctgctagtgctgaagct
atctttaccagtccaccagaaattacgatatctggttttgaacaacaacgggtacaaaca
tttcctcgagaagaaactgttgtgattgtagatccaccccgtaaaggttgttcggaagaa
tttttgaatcaattatacgattacagtccacaacggattgtatatatgagttgtggtcca
gctacacaagcacgtgatgctaaggggatcgtagaaattggtggatatgaaattacatcc
attcaaccctttgatttgtttccacaaacgaaacacatcgagtctttgattgtgtttgaa
aaaatatcttcgtaa
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