Faecalibacterium duncaniae JCM 31915: GXM22_06925
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Entry
GXM22_06925 CDS
T08154
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GXM22_06925 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_06925 (priA)
Enzymes [BR:
fdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM22_06925 (priA)
DNA repair and recombination proteins [BR:
fdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GXM22_06925 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_19
Glycos_transf_2
zinc_ribbon_15
AAA_16
PIF1
AAA_22
SLFN-g3_helicase
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QIA42819
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All DBs
Position
1428915..1431176
Genome browser
AA seq
753 aa
AA seq
DB search
MPKTVGVAVSNATFHFDKLYTYAVMPDQQDTVRLGSMVLVPFGRGSRARMGVVLACDAEP
ESAKLKFLFDVAPASACLTPELLRLVHFLKERTFCTYYEAVKAVIPYGAQYKPTVAEDGV
TPVLQKQLVRHTENAYKLVGTLPPKPRPTAKQLAAVALLAGGERTLSALEEKGISRAVLD
NLCAKGVLECSKVNKSIDLYSSIPLKNEPILLTEEQQAAYDALLPGLEDAAPHSALLYGV
TGSGKTLVFLKLIEHCLQMGRRALVLVPEISLTPQMILRLKSQFGKRVAVQHSALNHTER
LLQWQMIQDGGADIVVGTRSAIFSPLENIGLVIIDEEQEHTYRSESAPRYSAHEVARQRA
AENGALLLLASATPSTESYYAAQHGRTQLVRLTKRYGGNPLPKVQIVDMRAELASGNPRE
ISLAMEDAIRHNLEAGKQTILLLNRRGYQTVAQCEDCREVLKCQKCSVPMVYHKSAHKLL
CHYCGSQMDPPPARCPACGGKLQYRGFGTQKAEEELAKLFPEARILRMDQDTTAAKDAHE
KLLAKFARHEYDIMVGTQMVAKGLDFEDVTLVGVLGIDSLLFAQGFRAYETVFSLVTQVV
GRSGRAKDPGFAIIQTTDPDNPVLNLAAAQDYDAFFEQEIAYRKLGLYPPFCGLCVVGFA
GPKESEVARASARFAALLGRQAAKQPDLPLRVLGPTPGSIEKINDSYRYKLTVKCRNDRR
FRDLIRETLTLYEQEKLPGKATVVVDLHSDGDI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacggtaggcgttgcagtgagcaacgcgacctttcatttcgacaaactctat
acctatgccgtcatgcccgaccagcaggataccgtccggctgggcagcatggtgctggtg
cccttcgggcgggggagccgtgcccggatgggcgtggtgctggcctgcgatgccgaaccg
gagagcgcaaagctcaagttcctgttcgatgtggccccggcctctgcctgcctcaccccg
gagctgctgcggctggtgcactttttgaaggagcgcaccttctgcacctactacgaggcc
gtcaaggcggtcatcccctacggcgcgcagtacaagcccaccgtggcggaggacggcgtg
accccggtgcttcaaaagcagctcgtccgccacacggaaaatgcctacaagctggtgggc
acgctgcccccaaagcccaggccgaccgccaagcagctggccgcagtggccctgctggcc
gggggagagcgcaccctgtctgcattggaggaaaagggcatcagccgggcggtgctggac
aacctctgcgccaagggcgtgctggaatgcagcaaggtgaacaaatccatcgacctgtat
tcttccatcccgctgaagaacgagcccatccttctcacggaggagcagcaggccgcctat
gacgcgctgctgcccgggctggaggatgcagccccgcactcggccttgctctacggcgtg
accggcagcggcaaaacgctggtgttcctgaagctcatcgagcactgcctgcagatgggc
cgccgggcgctggtgctggtgcctgagatcagcctgacccctcagatgatcctgcggctg
aaaagccaatttggcaagcgggtggccgtgcagcattccgccctcaaccacaccgagcgc
ctgctccaatggcagatgatccaggacggcggcgcggatatcgtggtgggcacccgcagc
gcaatcttctccccgctggaaaacatcggccttgtcatcattgatgaggagcaggagcac
acctaccgctccgaatccgcgccccgctactcggcccacgaggtggcccggcagcgcgcg
gcggagaacggggccctgctcctgctggccagcgccacccccagcaccgagagctattat
gccgcccagcatggccgcacccagctggtgcgcctgaccaaacgctatggcggcaacccg
ctgcccaaagtccagatcgtggatatgcgggccgagcttgcctccggcaacccccgggag
atcagccttgccatggaggatgccatccggcacaaccttgaggcaggcaagcagaccatc
ctgctgctcaaccgccggggttaccagaccgtggcccagtgcgaggactgccgcgaggtg
ctcaaatgccagaagtgcagcgtgcccatggtctaccacaaatcggcccacaagctgctc
tgccattactgcggcagccagatggacccgccccctgccagatgccccgcctgcggcgga
aaactgcagtaccggggctttggcacccagaaggccgaggaggagctggcaaagctcttt
ccggaggcccgtatcctgcggatggatcaggataccaccgccgccaaggatgcccatgaa
aagctgctggcaaagtttgcccggcatgaatatgacatcatggtgggcacccagatggtg
gccaaggggctggatttcgaggatgtgacgctggtgggcgtgttgggcatcgattcgctc
ctgtttgcccagggcttccgggcctatgagaccgtgttcagcctcgtcacgcaggtggtg
ggccggagcggccgggcaaaagaccctggctttgccatcatccagaccaccgacccggac
aacccggtgctcaaccttgccgcagcgcaggactacgacgcgttcttcgagcaggagatc
gcctaccggaagctggggctttatccgcccttctgcgggctctgcgttgtgggctttgcc
gggccaaaggagagcgaggtggcccgggcttccgcccgctttgcggccctgctgggccgg
caggcggccaagcagcccgacctgcccctgcgggtgctgggccccacccccggcagcatt
gaaaagatcaacgattcctaccgctataaactcaccgtcaagtgccgcaacgaccgccgt
ttccgggaccttatccgggaaacgctgaccctctacgagcaggaaaaactgcccggcaag
gccactgttgtggtcgatctgcactcggacggggatatctga
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