Faecalibacterium duncaniae JCM 31915: GXM22_13080
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Entry
GXM22_13080 CDS
T08154
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu00521
Streptomycin biosynthesis
fdu00523
Polyketide sugar unit biosynthesis
fdu00541
O-Antigen nucleotide sugar biosynthesis
fdu01100
Metabolic pathways
fdu01110
Biosynthesis of secondary metabolites
fdu01250
Biosynthesis of nucleotide sugars
Module
fdu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GXM22_13080 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GXM22_13080 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GXM22_13080 (rfbC)
Enzymes [BR:
fdu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GXM22_13080 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
CK_II_beta
Motif
Other DBs
NCBI-ProteinID:
QIA43915
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All DBs
Position
complement(2731228..2731794)
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AA seq
188 aa
AA seq
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MGKFTFTETEIPGVVVIEPQVFGDDRGYFMETYQKDQFAAAGIDKEFVQDNQSRSTRGVL
RGLHFQKNHTQGKLVRVTKGEVYDVAVDCRPHSATFGKWVGVTLSEENKKMFYIPEGFAH
GFLVLSDVAEFCYKCTDVYDPTSEGGIPYDDPTVNVQWPDCGCEHKTSAKDKLHEPFAAQ
KFEFFEKW
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtttacgtttactgagaccgagatccctggtgttgtggtcattgagccgcag
gtgttcggtgatgaccgcggttattttatggagacctaccagaaggatcagtttgctgct
gccggcatcgacaaggagttcgtgcaggacaaccagagccgctccacccgcggtgtgctg
cgcggcctgcatttccagaagaatcacacccagggcaagctggtgcgtgtgaccaagggc
gaggtctatgatgttgccgtggactgccgcccccacagcgccacctttggcaagtgggtg
ggcgtgaccctgagcgaggagaacaagaagatgttctatatccccgagggctttgcccac
ggcttcctggtgctgagcgatgtggccgagttctgctacaagtgcaccgatgtctatgac
cccaccagcgagggcggcatcccctacgatgaccccaccgtgaacgtgcagtggcccgac
tgcggctgtgagcacaagaccagcgcaaaggacaagctgcatgagccctttgcagcccag
aagtttgaattctttgaaaagtggtga
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