Frateuria edaphi: LQ772_08770
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Entry
LQ772_08770 CDS
T08888
Name
(GenBank) hypothetical protein
KO
K08482
circadian clock protein KaiC
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
LQ772_08770
BRITE hierarchy
Motif
Pfam:
ATPase
AAA_25
AAA_22
AAA_16
RecA
ABC_tran
AAA_5
Rad51
nSTAND3
IstB_IS21
cobW
DnaB_C
AAA_30
AAA_7
SLFN-g3_helicase
NACHT
AAA_14
DEAD
AAA
AAA_29
AAA_23
AAA_10
Motif
Other DBs
NCBI-ProteinID:
UGB47358
LinkDB
All DBs
Position
1856410..1857816
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AA seq
468 aa
AA seq
DB search
MIEKFSTGIEGLDQLTDGGFLRGSAYIVQGPPGAGKTILANQFCYAHVRAGGRALYMTLL
AESSSRMLAYVSQMDFFEGSALPDAMQYISGYGVLEREGLPGLLKLVQHELKRHRATAMV
LDGTFVAQSVASEQEFRAFIHALQGVAGMADAVLVMLTHQNRDSSCPEHTMVDGWIELSD
ETQGFRAYRTIQVRKHRGAAILPGKHRVRITGEGVAVFPRVESALEAAPAARAEAHRVTS
GHEGLDTLLQGGLPAGSATLLVGPTGAGKTTLGLHYLSLSSAQEPGLMFGFYETPAHLLQ
KARSIGLDLDTPLDDGTLEISWLPPAENIVDELVRDIVSRARARKAKRVFVDGLVAIRDS
LVIPERMPYVINALSMQLGAIGASVVYTSEIPELQLDQAMMPSDELSAMVDNVLLLNTGR
RGHAFRRYLSVIKLRDSDFDPRTHEFHVNARGIAFGPDPRVAESREAG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaaaaattctcgaccggcatcgaggggctggaccagctgaccgatggcggtttt
ctccgcggctcggcctatatcgtccaggggccgcccggagcgggcaaaacgatcctggcc
aaccagttctgctacgcccacgtgcgcgcaggcggacgtgcgctctacatgacgctgctg
gccgaatcgagctcgcggatgctcgcctacgtcagccagatggactttttcgagggcagc
gcgctgcccgacgcgatgcagtacatcagcggatatggcgtgctcgagcgcgaaggcctg
cccggactgctcaagctggtccagcacgagctcaagcgacaccgcgccaccgcgatggtg
ctcgatggcacgttcgtggcccagtcggtcgcctcggaacaggagttccgcgcgttcatc
catgcattgcagggcgtggcgggaatggccgacgccgtgctggtcatgctcacccaccag
aaccgcgattccagctgtcccgaacacaccatggtggacggctggatcgagctgagcgac
gagacgcaaggttttcgcgcctaccgcacgatccaggtcaggaaacaccgcggcgcggca
attctcccgggcaagcaccgcgtgcgcatcacaggggaaggcgtggcggtgttcccgcgc
gtcgaaagcgcactggaagcggcgcccgccgcccgtgccgaggcccatcgcgtgacctcc
gggcacgaagggctggacacgctcctgcaaggtggcctgccggccggttcggccacgttg
ctggtgggacccacgggtgcgggcaagaccacgctcggcttgcactacctctcgttgtcc
agtgcgcaggagccggggctgatgttcggcttttacgaaacgcccgcgcacctgctccag
aaggcgcgcagcatcggcctggacctggacacgccgctcgacgacggaacgctggaaatt
tcatggctgccgccggcggagaacatcgtcgacgaactggtgcgcgacatcgtcagccgc
gcccgcgcgcgcaaggccaagcgcgtcttcgtcgacggcctggtggcgatccgagacagc
ctggtgattcccgagcgcatgccctacgtgatcaacgcgctgagcatgcaactgggcgcg
atcggcgcgagcgtcgtctacacctcggagatcccggagctgcaactggaccaggcgatg
atgcccagcgacgagttgtcggcgatggtcgacaacgtgctcctgctcaacaccgggcgg
cgcgggcatgcgttccggcgctacctgtcggtgatcaagctgcgcgacagcgatttcgac
ccgcgcacgcacgagttccacgtcaatgcccgcggcatcgccttcggaccggaccccagg
gttgccgagtcccgggaagcaggctga
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integrated database retrieval system