Ferrimonas lipolytica: HER31_08395
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Entry
HER31_08395 CDS
T06529
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fes
Ferrimonas lipolytica
Pathway
fes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HER31_08395 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fes03400
]
HER31_08395 (recB)
Enzymes [BR:
fes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HER31_08395 (recB)
DNA repair and recombination proteins [BR:
fes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HER31_08395 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIZ76890
UniProt:
A0A6H1UE70
LinkDB
All DBs
Position
complement(1793451..1797038)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSHILDPITFPLGGTRLIEASAGTGKTFTIAALYLRLVLGHGGDNGHPQDALMPDQILVV
TFTKAATEELKDRIRTRLVEAANCFRGMAQPDGIIAALMADYPHEEHPWCARRLELAAQM
MDQAAVHTIHSWCQRMLREHAFDSGSLFNLELETDLSALLEEAVRDYWRSHFYPCSAEAL
APIAQLYSEPMQLQKDLYGLLGKVEAGDDPTSIAAKQQQKICRCKKVWQQQWPSLRPQIE
EALANKQLKYVKAAQLDELQRWFEGDAPLPSTTVANRFGSGGMNAAAKKGVDPIESIAFA
ALEDLTIELENLDLKQALLRHASQWVADRIVAEKQRLALMGQDDLIIDLGKALDNDVDNQ
LGDKIRHQFPVAMIDEFQDTDPVQYGIFSALYLNQTNTGLMMIGDPKQAIYAFRGADIYT
YLQARDDTVGNHYTLETNYRSSIDMVAAANALFEQAQGYPDGPFMYQQRIPFASVNANGR
ERHWQLNGEPQAALNLWWDNDNAEPINKASYIDNMSHACAESITEFLNQGKQGNAGFAAN
GEDGELEPLQASDIAILVRDFGEANAVRDALTAKGVRSVYLSDKESVYSSDEAADLRLIL
NAVAHPQDDRAVRAALSTRTIGLSFNQLEQLGRNEQAWEQQLDGFKLLLQSWQTQGVLPM
VRNLLVRFDVAQRLLAEPARGERCLTNLLHLAELLQAAAASLDGELALLRYLNEQCSDKG
EKSDEQVMRLESDAELVKVITIHKSKGLQYKLVFLPFVFNYRPVNTSAPVLFFRDANGQN
QLSFNADDEAKASAERERLAEDIRLLYVAVTRAEYACYLGLAPLKIGKGKKVNVHLNALG
KLLADGAELDVADIGQQLQRLAQQPHTSISAPMARSNRVYSGDGEPAPLPPVRHYSRKPL
PNWWISSYSGLLRDMSHQHDDYATEARPEQLAEMMLASSDELELPQQPEIGTIHAFPKGA
APGTFLHDLFEWAAIDGVFRYDADEVEQHLHSICPSNGFAGEEAVLASWFAAALQVPLPL
FEQQASLLELPLAQPELEFWFEATNVDVGQLDRLVTESIWPGEIRPQLQPIQLQGMLKGF
IDLTFYYQGRYYVADYKSNYLGPDQSAYQAEAMRAAMLEHRYELQAVLYSLALHRLLQSR
LPDYDYERDVGGGLYIFLRGLEAGQLGQGALTVSPPKQLIEQLDCLFRGEELVDG
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgagccatatactggatcctattactttcccgttgggcggcacacgcttgattgaagcc
tccgctggaaccggaaaaaccttcactattgccgcgttatatctgcggttggtgttgggg
catggtggtgataacggccaccctcaagacgccttgatgccggatcaaatcttagtagtt
acctttaccaaagcggctactgaagaactcaaagaccggatccgtacgcggctggttgag
gcagcgaactgctttcgaggaatggcgcagcctgatggcatcatcgctgcactgatggcg
gattatccgcacgaggagcacccgtggtgtgcacggcgattagagctggcagctcaaatg
atggatcaagcagcggtgcacaccattcacagttggtgtcagcgaatgctgcgtgaacac
gcttttgacagcggtagcctatttaatctcgagttggaaaccgacttgtcggccctgctt
gaagaagccgttcgagattattggcggagccatttctatccatgcagtgctgaagcgttg
gcgccaatagcacagctgtacagcgaaccgatgcagctgcaaaaggatctctatggctta
cttggtaaggtagaagccggagatgaccctacctcaattgcggcaaaacagcagcagaag
atctgccgatgtaaaaaggtgtggcaacagcagtggcctagcctgcggccgcaaattgag
gaagcgttagccaataaacagctcaagtacgtaaaggccgctcaacttgacgagctgcag
cgctggtttgaaggggatgcgcctttaccgagcacgaccgtagccaatcgatttggtagc
ggaggcatgaacgctgccgccaagaagggcgtcgacccgattgaatcgatagcattcgcg
gcgctggaagatctaactattgagttggagaaccttgaccttaaacaagcgttattacgc
cacgcttcgcaatgggttgccgatcgtattgttgctgaaaaacaacgcttggccttgatg
gggcaagatgacctgattatcgatctgggtaaagcactcgataatgatgtcgacaatcag
cttggcgataagatcaggcaccaattcccagtggcgatgatcgatgaatttcaagatacc
gatccagttcagtatggtattttcagtgcactctatcttaatcaaaccaataccggtttg
atgatgattggcgatccaaagcaggctatctatgccttccgtggcgctgatatctatacc
tacctgcaggcgcgggacgacaccgtcggtaaccattacaccctcgaaaccaactatcgc
tccagcatcgacatggttgctgcagccaatgcattgttcgaacaagctcagggataccct
gatggcccatttatgtatcagcagcggatcccctttgccagcgttaatgccaatggccgt
gagcgtcattggcaactcaatggcgaaccgcaagcggcattgaatctatggtgggataac
gacaacgccgagccgattaataaggccagctacatcgacaacatgagtcatgcttgtgct
gagtcgattactgagtttcttaatcagggtaagcaaggtaacgccggtttcgctgctaac
ggcgaagacggcgaactagagccgttgcaggcatcagacatagctatcttggtgcgcgac
tttggcgaagcaaatgcggtccgcgatgccttgacagctaaaggcgtgcggtcagtctac
ctatctgataaggaatcagtttacagcagcgacgaagccgctgatctgcgcttaatcctc
aatgctgtggcacacccgcaggatgatcgcgcggtgcgcgccgcgctgtcgacccgcacc
attggtctgagcttcaaccagttggaacaacttggccgcaatgaacaagcgtgggagcaa
cagcttgatggttttaagctgctgctgcaaagctggcaaacccaaggggtattgccgatg
gttagaaatctgttggtccgttttgatgtagcgcagcgcctattggctgaaccagcccgg
ggggaacgctgcttgaccaacctgctgcacttagcagaactattgcaagcagcggcggcc
agtctcgacggtgaactggcgctgctgcgttacctcaatgaacagtgcagtgacaaaggc
gagaaatccgacgagcaggtgatgcggctcgagtccgacgccgagctggtcaaagtgatt
actatccacaaatcgaaagggttgcagtacaagctggtgttcttaccgtttgtgtttaac
tatcggccagtgaataccagcgcaccggtgctgttttttcgtgatgctaatggccaaaat
cagctcagttttaacgccgatgatgaagccaaggcgagcgccgaacgcgaacgtttagcc
gaggacattcgtttgctgtacgttgccgttactcgcgcggaatatgcctgttatctaggt
ttggcaccgcttaaaattggcaagggcaaaaaggtcaacgtgcacctaaatgcactgggt
aaattgcttgctgatggcgctgaattagatgtcgcagatattggccaacagctgcagcgg
ctggcgcagcagccacataccagcatcagtgcaccaatggctcggtccaatcgcgtttat
agtggcgatggtgagccggcgccgctgccaccggttcgccactattcacgcaagccactg
ccaaattggtggattagctcctattctggcttactccgagatatgagccatcaacacgac
gattacgccactgaagcacggccagaacagttggcagagatgatgctcgccagtagtgac
gagttggaactgccccagcagccggaaataggcaccattcacgcgtttcctaagggagcg
gcaccaggcaccttcttacatgatctgtttgagtgggccgccattgacggcgtattccgt
tatgacgccgacgaagtagaacaacacttgcacagcatctgcccaagtaacggttttgcc
ggtgaagaggcggtgcttgcctcttggtttgctgctgcgctgcaggtgccattaccgctg
tttgagcagcaggcgtcgttacttgaactgccattagcgcagccggaactggagttttgg
tttgaagcaaccaatgtcgatgtcggtcaattggatcgtttggtcaccgagtctatttgg
cccggagagatacggcctcagttgcagccaatacagctgcagggcatgctcaaaggcttt
atcgatttaaccttctactaccaagggcgctattacgttgctgactacaagtccaactac
cttggtccagatcaaagtgcttaccaagcggaggctatgcgtgctgccatgctggaacat
cgttatgaactgcaagcggtgttgtacagtttagccttgcatcggttattacaatcacga
ttgccagattacgactacgagcgcgatgttggcggtggtttgtatattttcctgcgaggc
ttggaagcgggacaacttgggcagggggcactgacggtgtcgccgcctaaacaacttata
gaacaattggattgtctgtttcgcggcgaggagctggtagatggctga
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