Ferrimonas lipolytica: HER31_13470
Help
Entry
HER31_13470 CDS
T06529
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fes
Ferrimonas lipolytica
Brite
KEGG Orthology (KO) [BR:
fes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fes03016
]
HER31_13470
Enzymes [BR:
fes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HER31_13470
Transfer RNA biogenesis [BR:
fes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HER31_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
Kdo
Motif
Other DBs
NCBI-ProteinID:
QIZ77816
UniProt:
A0A6H1UHX1
LinkDB
All DBs
Position
complement(2943629..2945581)
Genome browser
AA seq
650 aa
AA seq
DB search
MFQDNPLLQQLKAQIRETLPTVEGQVKATAKGYGFIETDKGESHFVPPPMMKKVVHGDRV
SAVLREDGDKTSAEPEQLLEASLDRFIARVQWFKGRLNLVPDHPMMKAGMRARCKKHIDE
KSLKDGDYVVAHLKRHPLREDDKSFLAEVSEFVAATDDPHVPWWVILAKHDLAKVEPEGP
STWQLDGAERQDLTALPFVTIDAASTKDMDDALYVERNDNGWRLTVAIADPTAYVQPGDD
VDQEAFKRCLTQYLPGYNVPMLPRQLADELCSLVEAEDRPALCAHIQVAADGELQPGAEF
FLATIRSQGKLAYDNVSDYLDEVADGWQPQQAEIAEQCQQLHALANARSAWRKENALVFP
DQPDYRFEVDDNGNVLNIHVDERRTANRIVEECMIVANAACAERLSATVGQGIFNAHAGL
DPERINLVVELLEKHHITFDAEQLLTMGGYCALRRVLDKQESGYLDARVRKLQAFAEVVG
TPQPHYGMGLEGYATWTSPIRKYSDMVNHRLLKATIAASDPTQVVTDQLLEQLAKMRKLH
RMCERHVGDWLYARYLLAESGSKTEFTGKIIDINRGGIRVKLAENGAVAFMPASHVSVDK
ARLNINGETAQASFDDELKLQVADTIAVTIGQVDVDQRSVMVLPVTPLGS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccgctgctgcagcaattaaaagctcagatccgcgaaaccctgcca
accgttgaagggcaggtaaaagctaccgccaaaggttacggctttatcgaaaccgataag
ggcgaaagccactttgtgccgccgccgatgatgaagaaagtcgtgcacggtgatcgtgtt
agtgcggtattgcgcgaagatggcgataaaacatccgccgaaccagagcagctgcttgag
gcgagcctagatcgctttatcgccagagtgcaatggtttaagggccgtttaaaccttgtt
cctgatcacccgatgatgaaagcgggcatgcgtgctcgctgtaaaaagcacatcgatgag
aaatcgttaaaggatggcgactacgtggttgcccacctgaaacgtcacccgctgcgtgaa
gacgacaagagcttcttggcggaagtgtcagagtttgtcgctgccaccgatgatccccat
gtgccttggtgggtgatcctcgctaaacatgacttagctaaggttgaaccagaagggcca
agtacatggcaactggatggtgctgagcgtcaagatctgaccgcactgccatttgttacc
attgacgcggcctcaaccaaagatatggacgacgccctatatgttgagcgcaacgataac
ggttggcgtttaaccgtcgctatcgctgatccaacagcctatgtgcagccaggcgatgac
gttgaccaagaggcctttaagcgttgcttaacccagtatctgccgggttacaacgtaccg
atgctgccacgtcaattggcagacgagctgtgctcgttggttgaagctgaagatcgtcca
gccctatgtgcccatatacaagtggctgctgatggtgaactgcagccgggggctgagttc
tttttagccaccattcgctcgcagggcaaactggcctacgacaacgtgtctgactacttg
gatgaggttgccgatgggtggcagccacagcaagctgagattgctgagcaatgccaacag
ctgcacgccttagctaatgctcgcagtgcgtggcgtaaagagaatgccttggtgttcccc
gatcagccagactatcgctttgaagtggatgacaacggcaacgtactcaatattcacgtt
gatgagcgccgtaccgccaaccgtattgttgaagagtgtatgattgttgctaacgccgct
tgtgccgagcgtctaagtgcaaccgttggccaaggtatttttaatgctcacgccggtttg
gacccagagcgcatcaatctggtggtagaactacttgagaagcaccacatcacctttgac
gcagaacagttgctgacgatgggcggttactgtgccttgcgccgggtattggataagcaa
gaaagcggttaccttgatgctcgagtgcgtaagctacaggccttcgctgaggtagtagga
acaccacaacctcactacggcatggggctagaaggctatgcaacatggacttcgccgatt
cgtaaatacagcgatatggttaaccaccgcttgttgaaagccactatcgctgcaagcgat
ccaacccaagtggtaactgaccagttgttagagcagttggctaaaatgcgcaagctgcat
cgcatgtgcgaacgtcacgttggcgattggctctatgctcgttatctgctggcggagtcc
ggttctaagaccgaatttaccggcaaaattatcgacatcaatcgcggtggtattcgagtg
aagttagcagaaaatggcgccgtcgcctttatgccagctagccacgttagcgttgataaa
gctcgtctgaacatcaatggtgaaaccgctcaggcatcgtttgacgacgagcttaagtta
caggtggccgataccatcgccgtgactatcgggcaggtagacgttgatcaacgtagcgtt
atggtgttaccggtgacgccgctgggcagttga
DBGET
integrated database retrieval system
