KEGG   Formica exsecta (narrow-headed ant): 115236479
Entry
115236479         CDS       T07422                                 
Name
(RefSeq) histone deacetylase Rpd3-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
fex  Formica exsecta (narrow-headed ant)
Pathway
fex03082  ATP-dependent chromatin remodeling
fex03083  Polycomb repressive complex
fex04213  Longevity regulating pathway - multiple species
fex04330  Notch signaling pathway
fex04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:fex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115236479
   03083 Polycomb repressive complex
    115236479
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    115236479
   04350 TGF-beta signaling pathway
    115236479
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    115236479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fex03036]
    115236479
Enzymes [BR:fex01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115236479
Chromosome and associated proteins [BR:fex03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     115236479
   HDAC complexes
    Sin3A-HDAC complex
     115236479
    BRAF-HDAC complex
     115236479
    REST complex
     115236479
    SHIP complex
     115236479
    MiDAC complex
     115236479
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     115236479
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115236479
  Chromatin remodeling factors
   NuRD complex
    115236479
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 115236479
NCBI-ProteinID: XP_029664824
LinkDB
Position
Unknown
AA seq 493 aa
MQQPKKRVCYYYDSDIGNYYYGQGHPMKPHRIKMTHNLLLNYGLYRKMEIYRPHKATQEE
MTKFHSDDYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVK
LNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGV
EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVP
IISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKRYNLPFLMVGGGGY
TIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYLEKIK
TRLFENLRMLPHAPGVQVQAIPEDGAIVDVFEPEEKMNLDERLSQHDLDKRIQHENEYSD
SEDEGEGGRRDNRSYKGTKKRPRLEKGQDMDLHIMNINMKKEDDVKLESKGNDKDERTNL
HNEEIKKDGGANL
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgcagcaacctaagaaacgagtctgctactattatgatagtgatattggaaattattat
tatggtcaaggacatcctatgaaacctcatcgtataaagatgacgcacaatctactcttg
aattatggtctttatagaaagatggaaatatatcggcctcataaagccacacaagaagaa
atgacaaagtttcatagcgacgattatatccgatttttgagatccatacggccagataat
atgacagaatacaataaacaaatgcaacgatttaatgtaggagaagattgccctgtcttt
gatggcttgtatgagttttgtcaattatcagctggtggatctgtagctgctgctgtaaaa
ctcaacaaacaagcatcagaaatctgtatcaattggggtggtggcttgcatcacgcgaaa
aagagcgaagcatcaggtttctgctatgtaaacgacattgtactcggaattttggagctg
ctgaaatatcatcagagagttttgtacattgatattgatgttcatcatggcgatggtgtg
gaagaagctttttatacaacagatagagtaatgacagtctcttttcacaaatatggcgaa
tattttcctggaactggagatctccgtgatatcggggcaggaaagggaaagtattacgct
gttaacatacctttgagagatggtatggatgatgaaagttacgagtcaatatttgttcct
atcatttcaaaagtaatggaaactttccaaccctctgctgtcgttttgcaatgtggtgcg
gactcattgactggcgatcgattgggatgttttaatttgactgtgaaaggtcatggcaaa
tgcgtagaatttgtaaaaaggtataatttacccttcttgatggtaggaggtggtggctac
acaatcagaaatgtgtccagatgttggacgtatgagacgtctgtagctctgggatctgaa
atcgcgaacgaacttccatataatgattattttgagtactttggtcctgactttaaatta
cacattagtccttcaaatatgacaaatcaaaacactcccgaatatcttgagaagattaaa
acgagattatttgaaaacctaagaatgctacctcatgcacctggtgtgcaagttcaggca
attccagaggatggtgctattgtcgatgtttttgaaccagaagaaaagatgaatcttgat
gaaagactatctcaacatgatttggacaagaggatacaacatgaaaatgaatacagtgat
agtgaagatgaaggagaaggtggacgaagagataacagatcatataaaggaactaagaag
cgaccacgtttggaaaaaggccaggatatggatttgcatatcatgaatattaatatgaaa
aaagaggatgatgtaaaattggaatcaaaaggaaatgataaagacgagagaacaaatctc
cataatgaagaaatcaagaaagatggtggggctaatctctga

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