Formica exsecta (narrow-headed ant): 115236479
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Entry
115236479 CDS
T07422
Name
(RefSeq) histone deacetylase Rpd3-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03082
ATP-dependent chromatin remodeling
fex03083
Polycomb repressive complex
fex04213
Longevity regulating pathway - multiple species
fex04330
Notch signaling pathway
fex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115236479
03083 Polycomb repressive complex
115236479
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115236479
04350 TGF-beta signaling pathway
115236479
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
115236479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fex03036
]
115236479
Enzymes [BR:
fex01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115236479
Chromosome and associated proteins [BR:
fex03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
115236479
HDAC complexes
Sin3A-HDAC complex
115236479
BRAF-HDAC complex
115236479
REST complex
115236479
SHIP complex
115236479
MiDAC complex
115236479
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
115236479
Heterochromatin formation proteins
Other heterochromatin formation proteins
115236479
Chromatin remodeling factors
NuRD complex
115236479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
115236479
NCBI-ProteinID:
XP_029664824
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MQQPKKRVCYYYDSDIGNYYYGQGHPMKPHRIKMTHNLLLNYGLYRKMEIYRPHKATQEE
MTKFHSDDYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVK
LNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGV
EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVP
IISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKRYNLPFLMVGGGGY
TIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYLEKIK
TRLFENLRMLPHAPGVQVQAIPEDGAIVDVFEPEEKMNLDERLSQHDLDKRIQHENEYSD
SEDEGEGGRRDNRSYKGTKKRPRLEKGQDMDLHIMNINMKKEDDVKLESKGNDKDERTNL
HNEEIKKDGGANL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacctaagaaacgagtctgctactattatgatagtgatattggaaattattat
tatggtcaaggacatcctatgaaacctcatcgtataaagatgacgcacaatctactcttg
aattatggtctttatagaaagatggaaatatatcggcctcataaagccacacaagaagaa
atgacaaagtttcatagcgacgattatatccgatttttgagatccatacggccagataat
atgacagaatacaataaacaaatgcaacgatttaatgtaggagaagattgccctgtcttt
gatggcttgtatgagttttgtcaattatcagctggtggatctgtagctgctgctgtaaaa
ctcaacaaacaagcatcagaaatctgtatcaattggggtggtggcttgcatcacgcgaaa
aagagcgaagcatcaggtttctgctatgtaaacgacattgtactcggaattttggagctg
ctgaaatatcatcagagagttttgtacattgatattgatgttcatcatggcgatggtgtg
gaagaagctttttatacaacagatagagtaatgacagtctcttttcacaaatatggcgaa
tattttcctggaactggagatctccgtgatatcggggcaggaaagggaaagtattacgct
gttaacatacctttgagagatggtatggatgatgaaagttacgagtcaatatttgttcct
atcatttcaaaagtaatggaaactttccaaccctctgctgtcgttttgcaatgtggtgcg
gactcattgactggcgatcgattgggatgttttaatttgactgtgaaaggtcatggcaaa
tgcgtagaatttgtaaaaaggtataatttacccttcttgatggtaggaggtggtggctac
acaatcagaaatgtgtccagatgttggacgtatgagacgtctgtagctctgggatctgaa
atcgcgaacgaacttccatataatgattattttgagtactttggtcctgactttaaatta
cacattagtccttcaaatatgacaaatcaaaacactcccgaatatcttgagaagattaaa
acgagattatttgaaaacctaagaatgctacctcatgcacctggtgtgcaagttcaggca
attccagaggatggtgctattgtcgatgtttttgaaccagaagaaaagatgaatcttgat
gaaagactatctcaacatgatttggacaagaggatacaacatgaaaatgaatacagtgat
agtgaagatgaaggagaaggtggacgaagagataacagatcatataaaggaactaagaag
cgaccacgtttggaaaaaggccaggatatggatttgcatatcatgaatattaatatgaaa
aaagaggatgatgtaaaattggaatcaaaaggaaatgataaagacgagagaacaaatctc
cataatgaagaaatcaagaaagatggtggggctaatctctga
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integrated database retrieval system