KEGG   Formica exsecta (narrow-headed ant): 115242055
Entry
115242055         CDS       T07422                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
fex  Formica exsecta (narrow-headed ant)
Pathway
fex03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115242055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fex03400]
    115242055
Enzymes [BR:fex01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     115242055
DNA repair and recombination proteins [BR:fex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     115242055
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C BRCT RNA_ligase PTCB-BRCT
Other DBs
NCBI-GeneID: 115242055
NCBI-ProteinID: XP_029673941
LinkDB
Position
Unknown
AA seq 952 aa
MSSDIEEEEQQQGEEKPFAVERAKSRRAKCKRCKCVIEKGEIRIGKYVTSFFADGKLMPA
WHHVTCLFEAFAKQRATTKRIDDPAEDVKGWEQLSDDDRKLILDKLEEFEKSYPTKISKK
TASPRKTVPSSSSTSGKTAEKKKKEATTDDKEKDKEERGKISSKDDSFREFRRVCSNIAS
VDAYTDKTAIIKRMFTRGMQGDGFKGDIVLWCKLLLPGAVKRIYNLQSKQLIKLFARMLL
QDEDAMLEHLEQGDVAETISVFFENSDAVSPCTASVLTIQDVDLFLEGLSRLTKEEEQIQ
HFRSILDRCTSNDLKIIVRLIKHDLRINAGPKHILEGVHVDAYKAFQMSRDLEAVIHRFL
PDSEEKPSNTSGSPSSRNKVAISLMTPVLPMLAEACTSVAMAMRKCPNGMLSEVKYDGER
VQVHKSGNDFRYFSRSLKPVLPHKVNLFKDYIAQAFPDGDDLILDSEVLMVDNETGQPLP
FGTLGIHKKAEFKNANVCLFVFDCLYYNGEILMNKPMLERRRILKDRMTEIPSRIMLSEV
HEVHDPRALAERIMYVLKLGLEGLVLKDIDSKYEPGKRHWLKVKKDYLCGGAMADSADLV
VLGAWYGTGNKGGMLSIFLMGCYDEERDKWLTVTKVHTGHDDTTLTELQDQLDMVKIGKD
VEKLPSWLHANKPMVPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRHD
KDWSTATSLNELRGLFKKKPDSVDFSHLLGTLADVEDIPRKRSPNPATSPRKFEKKARKI
TSSLDEPSTSFKIEDVSEEFFERRKRNKCDEEPDSIADIQPRSKKLKVSKIETEATVKRD
VGSDSEENTELNRDVDCYLTSGTNAEGSSKFSSVLDAKDEDNRSNNVLQDVRASLAPGFD
KSRRKDVQRMLKKLGATIVTENRPDLTTTHVIHTRAEIPSTAVLMWVKEQFG
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgtcgagcgacattgaggaggaagagcagcagcagggggaagaaaaaccgtttgccgtg
gaacgtgcgaagtccagacgcgcaaaatgcaagagatgcaagtgcgtcatcgagaagggc
gagatacggatcggcaagtacgtgacgagcttcttcgcggatggaaaattgatgccggcc
tggcaccatgtcacctgtttgttcgaagcgttcgctaaacagcgcgcgacaaccaagaga
atcgatgatcccgcggaggatgtgaagggttgggagcagttatccgacgacgatagaaag
ctcatcctggacaagctggaggaattcgagaaatcttatcctacgaagatttcgaaaaag
actgcgtcgccgcggaaaacagttccttcctcgagtagtacttcgggaaaaacggcggaa
aagaaaaagaaagaggccacaacggatgacaaggagaaagataaagaggaaaggggaaag
atctcgtcgaaggatgactcctttcgcgaatttcgacgcgtatgcagcaacatcgccagt
gtcgacgcctacaccgacaagactgcgattattaagaggatgtttacaagaggaatgcag
ggagacggttttaagggcgacatcgtgctctggtgcaaattgctgctgcccggcgctgta
aagagaatatacaatctgcaaagcaagcagctgataaaactgttcgcgcgaatgttactc
caggacgaggacgcgatgctggaacatctggagcaaggtgacgtggccgagacgatcagc
gtgtttttcgagaacagcgatgccgtgtcgccttgtactgcgagtgtgttgacgatccaa
gacgttgatctttttttggaaggattgtcgcgtttaaccaaggaggaggaacagatccag
cattttcgatccatcctcgatagatgtacctccaacgacctcaagataatcgtgcgtctg
atcaagcacgatctgaggatcaacgccggtccgaagcacattctcgagggggtccatgtg
gacgcgtacaaggcctttcagatgtcccgagatttggaagcggtgatacatcgttttctg
ccggattcggaggaaaagccttcgaacacctcgggctcgccatcaagtcggaataaagta
gccatctcgctgatgacgcccgtcttaccgatgctggcagaggcgtgtacatccgtggca
atggcgatgcgaaagtgcccgaacgggatgttatccgaggtcaagtacgacggcgagcgc
gtgcaggtgcacaaaagcggaaacgactttcgatactttagcagatccctcaaaccggtc
ctgccgcacaaggtaaatctgttcaaggattacatagcacaggcgttccccgacggtgac
gatttgattctcgattccgaggttctcatggtcgacaatgagaccgggcaacccttgcct
ttcggcaccttaggaattcacaaaaaagccgaatttaaaaacgccaatgtgtgcctcttt
gtttttgattgtctgtactacaacggagagatacttatgaacaaacctatgttggagcgc
agaaggattctgaaagacaggatgaccgagataccgagtagaataatgctatcagaagtt
cacgaagttcatgatccgcgtgctctggcggaaagaatcatgtacgtgttgaaattgggt
ctcgagggtttggtcctaaaggacatcgatagcaagtacgagccaggcaagagacactgg
ttgaaggtaaagaaggactatttgtgcgggggtgcaatggctgatagcgcagacctcgtc
gtgcttggcgcatggtacggcacaggcaataaaggtggcatgttatcgatcttcttaatg
ggctgctatgacgaggaacgcgataagtggttaaccgtgaccaaagtccacacgggacat
gacgataccaccttgacggagctgcaggaccagctcgacatggtgaagatcggcaaggat
gttgagaagctgccgagctggttacacgccaacaaacccatggtgccggattttgtggca
agagatcccaagaaacaaccggtatgggaaatcacgggggccgagtttacgaatcagggg
gtacacaccgcggacggtatcagcatccgatttccgcgtgtcacacggatccgtcacgac
aaggattggtccacggccaccagcttgaacgagttacgcgggctcttcaagaagaagccg
gattcagtcgactttagtcatctgctcggaacattggccgacgtcgaggatattccgaga
aaaagatctcccaatccggctacgtcgccgagaaaatttgagaaaaaggcaaggaagata
acgagctcgctggacgagccgtcaacaagcttcaaaattgaggatgtatcagaagaattc
ttcgaaagacggaagaggaataaatgcgacgaagaacccgatagtatcgcggatatccag
ccgcggagcaagaaattgaaagtgtcgaagatcgagacggaggcgacagtcaaaagagac
gtgggatcggattcggaagagaatacggagctgaatcgtgacgtcgattgttatcttacc
agcggaacgaatgcggaaggatcctccaagttctcgagcgttctcgatgcaaaggacgag
gataacagatccaataatgtcctgcaagatgtacgagcgagtttagcgcccggcttcgac
aagagcagaaggaaggatgtgcaaaggatgctcaaaaaactcggcgccacgatagtaacg
gagaatagaccagacttgacgacgacccacgtcattcacacgcgcgcggaaattccgtcc
acggccgttctcatgtgggtgaaagagcagtttggctaa

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