Formica exsecta (narrow-headed ant): 115244300
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Entry
115244300 CDS
T07422
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115244300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fex03400
]
115244300
Enzymes [BR:
fex01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
115244300
DNA repair and recombination proteins [BR:
fex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115244300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
OstA_2
mRNA_cap_enzyme
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
115244300
NCBI-ProteinID:
XP_029677723
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MAINLDAKIEFKELCNILENVAKAQGIKKKAQILQTFIDRCRNIGNKLKTEYPETDVSLY
PILRLILPRLDRERGPHNLKAPSLARLYADVHGFMKNSDNYKKLANYREPTSGKFVGNDF
ADRAYWILNKRLPKTSTGFTIARMNLFLDDISKKKATMQDKIETFKVLFRHITGFEMKWV
TRIVVKDLRLGIGTKQILDIYHQDANEKFLVTNDLREICNQLHDPKTKIKCGIQIFSHFK
PMLLERCDIENIEKLFRDNDLYYVQTKYDGERSQLHMKDGKFKYFTRRGYDITKNSGYGE
TGSSGFLTSVFTRRLNPNCHSFILDGELIGWHKEKGIFGTKGMNFDVKNLSANSRHQPCF
IAFDVILHNDILLVDVPYKDRLKLLNDIFIEEEGSLIICRSSLISNREELIEAFDECLRN
DEEGLVIKKHDMKYKPNVRDGGGCYKIKAEYSDNLVQDVDLIILGGYYGEGKYTGIIKSF
VIGVAAPTNNKEEYPSRFLAVASVSSGIRDQELRNLQTKFASHWIKECPENITGFKGKQP
DVWIRPEDSIILTIRATEMIRSSESPIGYSLRFPRVIDIRMDKPWYSQCTSSELLLLVKN
KGMIQKLTKREATLRDVDEAPVPKLQKTISRNKPIEYNVYKERIVPLTRLLDGKEICVIN
GTDELAKEQIEEILQQHSARIVQNPMNTTFCVIVGNDRTIRGKEMVNSGKYDVVTLDWFK
RVTNRSDCVISLGDFLPWELLCSRDITKHRLAENYDEYYDNFIVDADEETLKRSFDKIGK
PLADQFTVEQEKKMDKELFNGNASPYSLFRDIIGFFENQSYCAKFKFRFMSGTIKDSIDN
SVTHVFVEGNETDTVGNLKAHDLASVKIVKCKWIEECFQNGQICDITNYLIDY
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggccattaatttagatgctaaaattgaatttaaagaattgtgtaacattttggaaaat
gttgcaaaggcgcaaggaataaaaaagaaagcgcaaatcttgcaaacatttatcgataga
tgtcgaaatattggcaacaaactgaaaactgaatatcccgaaacggatgtttcgctgtat
ccaatattaagattgatattacctcgtcttgatcgagagcgtggaccacataatctgaaa
gctccttcattagcaagactttacgctgatgtacatggttttatgaaaaacagcgacaat
tataaaaagttagcaaattaccgagaacctacgtcaggcaaattcgtaggaaatgatttt
gctgaccgagcttactggattttaaataaaagattacccaaaacaagtactggcttcacg
attgcacgaatgaatttatttctcgatgatatatcgaagaaaaaagcaacaatgcaagac
aaaattgaaacatttaaagtacttttccgacacatcacgggtttcgaaatgaaatgggta
acacgaattgtagttaaggacctacgacttggcataggaacaaaacagatattggacatt
tatcatcaagatgcgaatgaaaagtttctcgtgacgaatgatttgcgtgagatttgtaac
cagttgcatgaccctaaaacgaaaataaaatgcggcatacaaatattttcgcatttcaaa
ccgatgctcctagagagatgtgacatcgagaatatcgaaaagctatttcgggataatgac
ttgtactatgtacaaactaaatatgatggcgagaggtcgcaacttcatatgaaagatgga
aaattcaaatattttacgcgtagaggatacgatattacaaaaaattctgggtatggagaa
accggatcttcaggtttcttgaccagtgtgtttacgcgacgtttaaatccgaattgtcat
tcttttatattggacggagaattaataggttggcataaagagaaaggaatatttggcacg
aaaggtatgaatttcgacgtcaagaatttgtcggcaaacagtcggcatcaaccgtgtttc
attgcattcgatgttattttacacaatgacattttacttgttgatgtgccttataaagat
cgactaaaactgctcaatgatatattcatcgaagaagaaggttctttaattatatgtcga
tcttctttaatttcgaatagggaggaattgatagaagcattcgatgaatgcctccgtaat
gacgaagaagggcttgttataaagaaacatgatatgaaatataaaccgaatgtccgagat
ggaggcggttgttataagatcaaagcagagtattctgataatttggtacaagatgtagac
ctgattatacttggcggttattacggagagggcaaatataccggaataattaaaagcttt
gtgataggcgttgccgctccaacaaataataaagaagaatatccatcgcgatttctcgct
gtagcatccgtaagcagtggaatacgggatcaagagttgcgtaatctccaaacaaaattt
gcatcacattggattaaagaatgccctgaaaatattacaggctttaaggggaaacagccg
gatgtgtggatccgtccggaagattctataatcctgacgatacgagcgaccgaaatgata
cgcagtagtgaatctcccattggatacagtttgcgatttcctagagttatagatatcaga
atggataagccatggtacagtcaatgcactagttccgaacttttgttattagtcaaaaac
aagggaatgattcaaaaattaaccaagcgagaagctactttgcgcgatgtagacgaggca
ccagtacctaaattacaaaagacaataagtcgaaataaaccaattgagtataatgtatac
aaagaacgaatagtaccgcttacgcgactattagatggaaaggaaatttgtgtgataaat
ggtaccgatgaattagcgaaggagcaaattgaggaaatactgcagcagcacagcgctaga
attgttcagaatccaatgaatacaaccttctgcgtgatagtaggcaatgacagaacgata
cgagggaaggaaatggtaaatagtggaaaatacgacgttgttactttggactggtttaaa
cgcgttaccaatcgatccgattgcgtgatctcattaggtgactttttgccgtgggaatta
ttgtgtagtcgagatataactaagcatcgactcgcggagaactatgacgaatattatgat
aattttattgtcgacgcggacgaagagactttgaagcgttctttcgacaagattgggaaa
ccgcttgcggatcagtttaccgttgagcaagaaaaaaaaatggacaaggaattattcaat
gggaatgcatcgccttattcactgtttagagatataattggattcttcgaaaaccaatcg
tattgcgctaaatttaaattccgtttcatgtcaggtacgattaaagacagtatcgataat
tccgttacgcatgtctttgtagagggtaacgaaacagatactgtgggaaatttgaaagca
catgatctagcgtctgtaaaaatcgttaaatgtaaatggatcgaggaatgtttccaaaat
ggccaaatatgtgatattacaaactatctgattgattattag
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