Fusarium falciforme: NCS54_00107500
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Entry
NCS54_00107500 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
ffc
Fusarium falciforme
Pathway
ffc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS54_00107500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00107500
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCS54_00107500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
PH_9
ADNP_N
Motif
Other DBs
NCBI-GeneID:
77787024
NCBI-ProteinID:
XP_053002685
LinkDB
All DBs
Position
1:join(3819680..3819695,3820181..3820573,3820690..3820847,3820914..3824621)
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AA seq
1424 aa
AA seq
DB search
MGRNRVLSFMSQFSAGTKTPPPSSSPPSGSPYGHRKTTSVNEPFPDHRVSNDISRPTTPP
SRPDYGTPVSGSPIDTPPRRRSSSRPPSMVLAHQPPIMDITEDTIPELQPIFSFLNSHSN
KLYQEGYFLKLDDQNTQGRPNPDRTWTECFAQLVGTVLSLWDAAELDAAGEDGEVLPKFI
NLTDASIKMIESLPTRSSDEQPLQNILSISTAGRNRYLLHFNSRHSLLQWTAGIRLAMFE
HSTMQEAYTGALIAGKGKTLNNIGVIMERSRFKTEEWVRVRFGAGVPWRRCWCVITPPDE
KEYAKLQKEMKKRSPYDRSPVPTLKGDIKFYDQRKDGKKQKKAQPIATITDAYSAYAIYP
QAKSLIEASTLLKIEGNIAIHTDPPSSTEGFVFIMPETHPAVTGFEMLLRFLFPTWDTFG
LYGRPGKLVASILDSRSLMFAMPKSSRYGYLENLDVSNLILEDGSSNWGEREWRKKLKEA
TGTRMNAMDDAPTTRSRSNSRKSVRLSFGDGAKQRIGFQDQQGPTRSSRSFSLTERTRTD
SAPADPSRVAFGQGHGRNSSDPNHLADPPPPRHDFNGNSPYSGSPQRGPTPVGGQYQNQA
PAELGNGYEHNRGASGSPPLRDLDGMRKMHTPEPVSRPPAFNHGPQARPVSKAYHSPELR
RANSRLSSSTLAQLATAGGLGGPNDSNPSPREGEVDAARSGPSVPQSHANSVGISANDNR
SREALSPPNQDPSSNNLPPPLNLQKQRSRSPLAQSPYGPPSPYARGPNSRPGTSDGQRSP
MPPGMGPPRSPHPQNPNRRPDMGPDGRRPSDPRRPGPGPDGRRPSDPRRPGPDGRKPSDP
RGPGPDGRRPSDPRARGNGPPPPGHGPPPPGPYGNFRPGPGRSPGPPGPPGPPGPPGPHG
PPMQMAHRKPVPERAPTFEAPTFEEPKASTMSTSSVVTANEIIDHYAFDQGRRPVGTPTS
DRRPPPPQRQGSNRSGQSSHYDDSSSVNSIDYASTHKSNETKKSMERPRAGVLKTVGGSD
EPEMPRDAGYDIPEINFGPTINYGATQQHNRAPSALTPGSNPAQRPYSPADQRPTPPAHK
SSGSHGSQGSHGRKDSEDMKRTMAWQPGASAAPSTSQGLSAEQFVQQRAAHARSASSNTL
SGGRPTTPGGSMKRTSSYDMLQGLQGGPGRHSRSSSAELLSRPGSRGANSALNFASSGDA
PTHLSAREQEQVARLTGAPLISVPGHQRQGSQGSAMLGHQRQASSGSGLVAAIEAREREK
QQIKQGMSSQAVQHAINQRQQQQAAMAYQQQVSQQHQQQLAQQQMAQQQMAQQQMMQQQL
AQQQQMAQQQAAYQQQAYQQQQMGGAYSTMGRGGGGGQYGAGGMPYGGTQQAGGYGQPAS
FSRPLRTPQQVDPRFAPPQGQYGPAPGSQQAPRNVHPQYQGQAF
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaatcgagtcctttcttttatgtcccagttctctgcgggcacaaagacacca
cctccttcgtcctctcccccctccggctcgccgtacggacaccgcaagacgacatctgtc
aacgagcccttccccgatcatagagtcagcaacgacatctctcgaccaactacaccgccg
tcacgaccggattatggcacgcctgtgagcggttcacccattgatacgccccctcgtcga
cgcagctcatcacgacccccgtctatggtcctggcacaccaaccgcccatcatggatatc
acagaggacacgattccggagcttcagcccatcttttccttccttaacagccactccaac
aagctgtaccaggaaggatatttcctcaagctcgacgatcagaatacacagggccgcccg
aaccctgatagaacctggaccgaatgctttgcccagctcgtgggaaccgtcctgtcacta
tgggacgctgccgagctcgatgccgccggcgaggatggcgaggtcctgcccaagtttatc
aacttgacagatgcgtctattaagatgatcgaatctttgcccacgagatctagcgatgaa
cagcccctacagaacatcctgagcatctcaacagccggaaggaaccgctatctccttcac
ttcaactcgcggcattcactgctacaatggaccgctggaatccggctcgccatgtttgag
cattccacaatgcaagaggcctataccggtgccctcattgctggcaagggtaaaacactt
aacaatattggcgtcatcatggagaggtcgcggttcaagaccgaagaatgggttagggtc
cgtttcggtgccggtgttccttggagaagatgctggtgtgtcatcacaccgcccgacgag
aaggagtacgcaaagctccagaaggagatgaagaagaggtcgccatatgaccgttctcca
gtcccaactctgaagggagatatcaagttttacgaccagcgcaaggacggcaagaagcaa
aagaaggctcagccgattgcgacaatcacggacgcttactcggcatatgccatctatcct
caagccaagtcactgatcgaggcttcgacgctgctcaaaatcgagggtaacattgctatc
cacaccgacccaccgtcgtctaccgaggggttcgttttcatcatgcccgagactcaccca
gccgtcactggctttgagatgttgctccggttcctcttccccacctgggatacctttggc
ctgtacggccgtccgggaaagctcgttgccagcatcctcgactcccgatctctgatgttt
gccatgcccaagagttcacgttacggttatctcgaaaacctcgacgtctccaacctgatt
ctcgaagatggtagctctaactggggcgagagagagtggagaaagaagctgaaggaagcg
acggggacaaggatgaatgccatggatgatgccccgactacacgatcccgaagtaacagt
cggaagagcgtcagactaagctttggagacggtgcgaaacagagaatcgggttccaagac
cagcaaggtcctaccaggtcctcgcgttcattctcactgactgagcgcacgcgaacggat
tctgcacctgccgacccatcacgggtggcctttggccaaggtcatggccgcaactcctct
gaccctaaccatctggccgaccctcctcctcctcgtcatgatttcaatggcaacagcccc
tattctggttcgccccagcgtggcccaacccctgtgggcggccaatatcaaaaccaggcc
cctgctgagctcggcaatggttatgaacacaaccggggtgcttcaggctctccacctttg
agagatttggatggcatgcgaaagatgcatactccggagcccgtttcacgacccccggct
ttcaaccatgggccccaggcccggcccgtcagcaaagcgtaccactctcctgagctccgg
cgggctaacagcaggctttctagctccacgcttgcccagctggctacggctggaggcttg
ggcggaccaaatgattcgaatccttctccacgagaaggcgaggtggacgctgcgagatct
ggaccatcggtacctcaatcacacgccaactccgtagggatatctgctaacgacaaccgc
tcgcgtgaagctttaagtccgccaaaccaggatccctcctccaacaacctcccaccaccg
ctcaatctccaaaaacaacgatctcgatcccccctagcccagtccccctacggacctcca
agcccttatgcgcgtgggccgaactcccgacctggaacctcggacggtcagcggtctccc
atgcccccaggcatgggccctccacgctcccctcatccgcaaaaccccaaccgtcgaccc
gacatgggacccgatggacggcgaccttcggaccctcgtcgccctggacctggacctgat
ggacggcgaccctccgatcctcgtcgtcccggacctgatggacggaagccttcagacccc
cgaggccccggacccgacggccggagaccctcagatccccgggcccgaggcaacggaccc
ccaccgccaggccatggcccaccacctcctggtccttacggcaactttcggccaggcccc
ggccgatctcctggcccccctggacctcctggacccccggggccccccgggccacatgga
cctcccatgcagatggcccatcgaaagcctgtgcccgagagagcgccgacttttgaagcg
ccgacctttgaagaacccaaggcgtcaaccatgtcgaccagcagtgtcgtgacagccaat
gagattatcgaccactatgcatttgatcaaggccgccgacctgtgggcaccccaacctct
gacagaaggccgcccccacctcaacgacagggcagcaacaggagcggccagagcagccat
tacgacgacagctcttctgtgaacagcatcgactatgccagcacccacaagtctaatgaa
accaagaagtctatggagcgacctcgcgctggagttctcaagacagttggtggcagtgac
gagcctgaaatgccacgagacgccggctatgacatcccagagatcaactttgggccgacc
attaactacggcgccacgcaacagcacaacagagcacctagtgctctgactcctggatca
aacccggctcaaaggccttattctcctgcggaccaacggccaacaccgccagcgcacaag
tcatctggatcccatggatcccagggatctcatggacgcaaggattccgaagacatgaag
cgaacgatggcatggcagccaggtgcatcggccgcaccgtccacctcccaaggcctcagt
gctgagcagtttgtacagcagagagcggcccatgctcgcagcgcctctagcaacacgctg
agtggaggtcgacctactacgcccggcggatcaatgaagcgcaccagttcttacgacatg
cttcagggcctccaaggtggcccaggtcggcattcacgaagtagttcagctgaattgctc
tcccgtcctgggtcacgcggtgcgaactcggctctcaattttgccagctcgggagatgca
cccactcatcttagcgctcgcgagcaggagcaggttgctcgtctgacgggggcgccattg
atcagtgtgcccgggcatcaacggcagggatcccaaggttccgctatgttgggtcaccag
cgacaagcctcgtctggctcaggtttggtcgccgccatcgaagcccgagaacgggagaag
cagcagataaagcaggggatgagcagccaggcagtacagcatgcgatcaaccagcgacag
caacagcaggccgccatggcataccaacaacaggtctctcagcagcaccagcaacagctg
gctcaacaacagatggcgcaacagcagatggctcagcaacaaatgatgcaacagcagctg
gcacagcagcagcaaatggctcaacagcaagcagcataccagcaacaagcctatcagcag
cagcagatgggcggcgcatacagcactatgggtcgaggaggcggaggcggtcagtatggc
gctgggggaatgccgtatggcggaacccagcaggcgggaggttacggacaaccagccagt
ttctcgcggccgctccggacaccgcagcaggttgacccccggttcgcgccgccacagggt
cagtatggcccggcgcccggatctcaacaggcgccgcgcaatgtccacccacagtaccag
gggcaggcattttaa
DBGET
integrated database retrieval system
