Fusarium falciforme: NCS54_00835300
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Entry
NCS54_00835300 CDS
T09198
Name
(RefSeq) DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NCS54_00835300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffc03400
]
NCS54_00835300
Enzymes [BR:
ffc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NCS54_00835300
DNA repair and recombination proteins [BR:
ffc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NCS54_00835300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
LIG3_BRCT
RTT107_BRCT_5
mRNA_cap_enzyme
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
77794302
NCBI-ProteinID:
XP_053009716
LinkDB
All DBs
Position
6:join(2535462..2535565,2535616..2538487)
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AA seq
991 aa
AA seq
DB search
MGSQQEQRSQTEEAKHEDEIQYGTVGITQEEMEEKYPNRPKNHSKTLVFSELFRELFNPL
SENKKQNATGAGPRKAFRGVNKLSPHEQRRHIIERFIIRWRKEVGPDFYPALRLILPDKD
RDRGVYGLKENAIGKLLVKLMKIDKSSEDGYNLLHWKLPGQTTASRLAGDFAGRCFEVIS
KRPMRTTVGNMTIAEVNEQLDKLAASTGETENLRVFETFYNHMNAEELMWLIRIVLKQMK
VGATEKTFLDLWHPDGDALFSVSSSLRRVCWELSDPEIRLEQDEAGVALMQCFQPQLAQF
QMPASFQKMIQLLRPTEEDPEFWIEEKLDGERMQMHMVEDKKHPGGRRFCFWSRKAKDYT
YLYGDGLQDENSSLTRHLKKAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAAISEQQ
NKSDTDSAGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAVKSVHRRLEIHNYTSATT
SDAIEPLLREVVANASEGLVLKNPRSMYRLNHRNDDWLKVKPEYMSEFGESLDCVIIGGY
YGSGKRGGILSSYLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWI
EWDQKNPPSEYIELGGGELRQYERPDMWIRPKDSVVVSVKAASVGPSDQFARGFTLRFPR
FRRLRLDRTWDTALSLEEFQELKDRVDEESKEKAMTVEDRKRRNPKRIKRELVIAGEDSA
PVEFEGEKTKLFEGLEFCVLSEALKPYKKTKTQLETIIKENGGTISQRAAPGTNMVLIAD
KKVVKVASLMKGGDVDLIRPKWIKDCLEQDLGQFLLPFEESHLFHATEAMKRAAEQNTDQ
FGDSYARDMSIDELKDLMDYMPKIEDGEPFDKNEFLQQLEEHGKDLGNLRSFIFRRCVVL
FHGVEIGANRVSRLKHFVKYGGGSVTEDAGDLSVTHVVIEGGDPMQVGETADMVRKELSS
RRTQPRVVNGKWIDDCWKEGTLLDEEQFVVP
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggggagccagcaagaacagagatcccaaacagaggaggcaaaacatgaagatgagatt
caatatggcacggtgggcataacccaggaggaaatggaagagaaatacccaaaccgccca
aagaatcactcaaagaccctagtcttctctgagctgtttcgagaattgtttaatccctta
agcgaaaacaagaagcaaaatgccaccggcgcaggccctagaaaggcctttagaggtgtc
aataagctctcaccgcacgagcagcgacgacacattatcgagcgcttcattattcgatgg
cgcaaagaagtcggtcccgatttctaccctgccctacgtctgatcctccccgacaaggac
cgcgatcgcggtgtttacggcctcaaggagaatgccataggaaaactcctggtcaagttg
atgaagatcgataagagctctgaggatggctacaatcttttgcactggaagctccctggt
caaacaactgcctctcggctagctggtgattttgctggacgatgtttcgaggtcatttcg
aagcgcccgatgcgcacaaccgtcggcaacatgacaatcgccgaggtgaacgagcagctg
gataagcttgctgcgtctacaggagagacagagaacctgcgtgtctttgagactttctat
aaccacatgaacgctgaagagttgatgtggcttattaggatcgtcttgaagcagatgaag
gtcggcgccaccgaaaagacctttttggacctctggcacccggacggcgatgcccttttc
agcgtctcctcgagtttaaggcgagtatgctgggaactttctgaccccgagatccggctc
gagcaggatgaggccggcgttgcccttatgcaatgcttccaaccgcaacttgctcagttc
cagatgcctgcttcttttcagaagatgattcaacttcttcgcccaacggaggaagatcct
gagttctggatcgaggagaagctggatggcgagcgcatgcaaatgcacatggttgaggat
aaaaagcaccctggcggccggaggttttgcttctggtcgagaaaggccaaggattacacg
tacctttacggcgacggacttcaagacgagaactcaagtttgacacggcatctcaagaag
gctttcgcatcaggtgtcaagaatctgattctggacggcgagatgattacctgggatatg
ggtgttgacaagatagtccctttcggcactctcaagacggctgctatctcagagcagcag
aacaagtcggatacggactcagctggtcaccgtcccctattcagggtctttgatatcctc
tatctcaacaacaagcccttgactcagtacaccctccgagatcgacaccgcgctcttgaa
aaggccgtcaaatctgttcatcgacgtcttgaaatccacaactacaccagcgcaacaact
tctgatgctattgagccacttctccgtgaagttgttgccaacgcttcagagggtcttgtg
ctcaagaaccctcgctccatgtaccgtctgaaccaccgaaacgatgactggctcaaggtc
aaacctgaatacatgtctgaattcggcgagtccctcgactgtgtcattatcggtggctac
tacggctcagggaagcgcggtggaattctttcgagttacctatgtggtctacgagtgaca
caaaatcacatccaagctggcgcaaatcccgaaaagtgctttagtttcttcaaggttgga
ggtggattccgtgccgaggactatgcagaaattcgacaccgaacagaaggaaagtggatt
gagtgggatcaaaagaacccaccttcagaatacatcgagcttggtggaggtgagctcaga
cagtacgagcggccagacatgtggattcgtcccaaagactcggtcgttgtttcagtgaaa
gcagcgagcgttggcccctcagaccagtttgctcgtggattcactctgcgcttcccgcga
ttcaggcgtctccgtttggatcggacatgggacactgccctctccctagaggagtttcag
gagcttaaagaccgagttgacgaagagtcaaaagaaaaggccatgacggttgaagacaga
aagagacggaatcccaaacgaatcaagagggagcttgttatagctggagaggattcagcg
ccggtcgagtttgagggcgagaagacgaagctctttgaagggttggagttttgcgttctt
tctgaagctctgaaaccctataagaagacaaaaactcaactcgagaccatcatcaaagaa
aatggaggcaccatttcccaaagagcggcaccaggtacaaacatggtgcttattgccgac
aagaaggtggtcaaggtggcgagtctcatgaagggaggagacgtggaccttattcgtccc
aaatggatcaaagactgcctggagcaggatttgggacaattcctgctgccgtttgaggaa
tcacacttgtttcacgctacagaagcgatgaagcgcgcggcggagcaaaatacggatcag
tttggagacagctacgctcgagatatgtctatcgacgaactcaaggatctgatggactat
atgcccaagattgaggacggggagcctttcgacaagaatgagtttctacagcagcttgaa
gaacacggcaaagatctgggcaacttgaggagcttcattttccggcgctgtgtggtgttg
ttccatggggttgagattggtgccaatcgggtctctcggttgaagcactttgtcaagtat
ggtggaggaagtgtcaccgaggacgcaggcgacttatctgtgacacacgtcgtgatagag
ggaggagatccaatgcaagtgggtgagacggccgatatggtgcgcaaggagctgagctct
agacgcacacaaccgagggtggtaaatggaaaatggatcgacgattgctggaaagagggc
acattgcttgatgaggagcagtttgtggttccatga
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