Fulvia fulva: CLAFUR5_00876
Help
Entry
CLAFUR5_00876 CDS
T08195
Name
(RefSeq) Pre-mRNA-processing ATP-dependent RNA helicase prp5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ffu
Fulvia fulva
Pathway
ffu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLAFUR5_00876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffu03041
]
CLAFUR5_00876
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLAFUR5_00876
Spliceosome [BR:
ffu03041
]
Complex A
U2 snRNP components
U2 related factors
CLAFUR5_00876
Complex B
CLAFUR5_00876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
71980754
NCBI-ProteinID:
XP_047756401
LinkDB
All DBs
Position
1:join(4303219..4303314,4303378..4303656,4303708..4306815)
Genome browser
AA seq
1160 aa
AA seq
DB search
MARSPPRRRHDDRPRDHRDQRESYSRRSRSRDRYRDDNYRDDRRGARRERDDDRYVSRDH
GNDRRSHHRRDSPPHARRDERRERSPVRDGRSSRSDRVRSRDRDDIGNCDSKRPRRDSND
RSSEKSSRPTTANGPPKSEAKPAVTTAEAQAAAKAQQEKLARVEAWKQRKLRTEATKTGP
VDASPTVSRPVSAAGSPAPNKNESKPASPPRAKFDPSAIKKRADAAMAKAKSEKSTLGNA
AAIPTTSAGMANGTGVITTPASTTNGGPAVPLGDAKISSFGLNKSAGDAKANTARATATL
DDDEDVQRKFRKLPDLPQSSVSSDAALANDQEEQAELQDDLRSDEEEAEAAREAAQRRAE
AQTEKDVDMVDDGGADDAVEAPAPALAENNPNKMDVDEEVDPLDAFMSDLGQSMEKAPAP
KLIGRWANRGTQLFDEDDGPDLDAVGDNPEDLLSNPKRKKKEVPNVDHSKVEYEPIRKNF
YNESIEMAEMSQEDVDKLRADLDNIQVRGLDVPKPVTKWSQCGFGAAILDVIREQKFESP
TSIQCQALPAIMSGRDSIGIAKTGSGKTLAFVLPMFRHIKDQRPVANLEGPIGIIMAPTR
ELAVQIHRECKPYLKALNLRGVCAYGGAPIKDQIAELKRGAEVVVCTPGRMIDLLAANAG
RVTNLSRVTYVVMDEADRMFDMGFEPQITKILGNIRPDRQTVTFSATFPKKMESLARKAL
NKPVEIVVGGRSVVASEITQLIEVTPEDTKFRRVLQLLGDLHEKDEDARSLIFVERQETA
DDMLKELGKKGYPCVSVHGGREQIDRDQAILDFKAGIVPIMVATSVAARGLDVKQLKLVI
NYDSPNHGEDYVHRAGRTGRAGQTGTAVTLVTPEQERFAPFLVRALQDSKQETPQALQDM
AASHKKKVQSGEATNAGSGFGGKGIERLDAARAADRARERKQFKTEDEPEEEEETTKDKK
ESAVDALVAKAAGTVKAHDAITDVPAQPTQQSMDQKLQEHLDNAKQVTKVEVPAPSAAPQ
DTMSKAAAAAAAINARLGTRGTARPGAPIDNRGPDAGAFHATLEINDFPQKARWAVTNRT
NVAKILEATGTSITSKGNYYAPGTAPGPEEPAKLYILVEGDTEIAVSSAMKELSRHLTEG
TLAAQDVEARGGTGGRYKVI
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctcaccacctcgtaggagacatgatgaccggccgcgagatcaccgcgatcag
cgagagagctattcgcgtcgctctcgcagcagagatcgctatcgcgacgacaactaccga
gacgaccggcgcggagcacgacgagagcgagacgacgaccgctacgtgagccgcgaccat
gggaatgatcggcgtagccaccatcgcagggattcgcctccacacgccagacgtgacgag
agacgcgagagatcaccggtgagagatggacgatctagccgtagcgatcgtgtccgatcc
cgtgaccgcgacgatattggtaactgtgacagtaagcgacctcgacgtgattcgaacgac
cgtagcagcgaaaagtcttcccgcccaacgacagcgaacggtccgccaaaatccgaggcc
aaacccgcagtcactaccgctgaggctcaagcggctgcaaaggctcagcaagagaaattg
gccagagttgaagcttggaagcaacgcaagctgcggactgaagccactaagaccgggcct
gtcgatgcctcacctacagtctctcgaccggtctctgctgctggatcgccagccccaaac
aagaatgagtccaagcctgcatcgccaccacgcgcgaagttcgacccctctgccatcaag
aagcgtgcagatgcggcaatggccaaagcaaagtcagagaagtccactctaggtaatgcc
gctgcaattcctaccaccagcgctggcatggctaacggtactggtgtcatcaccacacct
gcgagcactaccaatggcggacctgcagttccattgggtgacgccaagatcagttcattc
ggcctcaacaaatctgctggagatgccaaggcaaacactgctcgggctacagcgacactg
gacgacgatgaggatgtacagcgcaagtttagaaagcttcctgatctacctcaaagctct
gtttccagtgatgccgcgcttgctaacgaccaagaggaacaagctgagttacaggacgat
cttcgcagtgacgaggaagaggcagaagccgcacgcgaagccgctcagcgacgcgctgaa
gcacagactgagaaagatgtcgacatggtggacgatggtggagcagacgatgcggttgaa
gcgccggcacccgctcttgcggaaaataacccaaacaagatggatgtcgacgaggaggtc
gatcctctcgatgcattcatgagcgatcttgggcaatcaatggagaaggcaccagcacca
aagttgataggcaggtgggctaatcgtgggacccagctgtttgacgaagacgacggccca
gatctggatgcagtcggcgacaaccctgaagatcttctctcgaaccccaagcgcaagaag
aaggaagtgccaaacgtagatcattcgaaggtcgagtacgagcccatccgcaagaacttt
tacaacgagtccatcgagatggccgagatgagtcaagaggacgtggacaagctccgcgca
gatctcgacaatattcaggtccgtggtctcgatgtcccgaagcccgtgacaaagtggtca
cagtgcggctttggtgccgcgattttggatgttatccgcgagcaaaagttcgaaagccca
acatcgatccaatgccaggcgctgccagcaatcatgtccggtcgagacagcatcggaatt
gccaagacaggttctggtaagacattggctttcgtactccccatgttccgccacatcaag
gaccagcgaccagtcgccaacctcgaaggtccaatcggtatcatcatggctccgactcgt
gaactcgcggtgcagattcatcgtgagtgcaagccataccttaaagcgttgaatcttcga
ggcgtctgtgcctatggtggagctcccattaaggaccagatcgctgagttgaaacgcggt
gctgaggtggtggtctgcacaccgggtcggatgatcgatctccttgctgccaatgccgga
cgagtcaccaacctcagccgcgtgacatatgtggtcatggacgaggcagatcgcatgttc
gacatgggctttgaaccgcaaatcaccaagatcctcggcaacattcgtccagatcgtcag
actgtgacgttctctgcgacctttccgaagaagatggagtcgctagctcgcaaagctctg
aacaaaccagtcgagatcgttgttggtggtcgcagcgttgtcgcttctgagattacacaa
cttattgaggttacacccgaggacacaaagttccgtcgtgtgctgcaactacttggcgac
cttcacgagaaggatgaagacgctcgatcgctaatctttgtggagcgtcaggaaacagcc
gatgacatgctcaaggaactcggaaagaaggggtatccctgtgtctctgtccacggagga
cgagagcagatcgatcgagatcaagccatcctcgacttcaaggcgggtatcgttccgatc
atggttgctacatcagtggccgccagagggttagatgtcaagcagcttaagctcgtcatc
aactacgactcgccaaaccacggagaagattacgttcatcgagcaggtcgtacgggtcgt
gctggtcagactggcacagctgtcactctcgtcacacccgaacaagaacgctttgcgcca
ttcctggtgcgcgcactacaggacagcaagcaggaaacaccccaagcgttgcaagacatg
gcagccagtcacaaaaagaaagtccagtctggcgaggcaacaaacgctggctcgggcttc
ggtggaaagggcattgagcgtctggacgctgcacgtgctgctgatcgcgctcgagagagg
aagcaatttaagactgaagacgagccagaagaggaggaagagaccacgaaagacaagaag
gaaagtgcagtcgatgccctcgtggcgaaggctgccggcaccgtgaaggctcacgatgct
atcaccgatgtaccggctcagcccactcagcagtccatggaccagaagctgcaagagcac
ttggacaacgccaagcaggtcaccaaggtagaggtaccagcaccttctgccgctcctcag
gacactatgagcaaagctgccgcagcagccgcggccatcaacgctcgtctcggcacaagg
ggtactgctcgtccgggcgctcccatcgacaaccgtggtccagacgctggtgctttccac
gccactctcgagatcaacgacttcccacagaaggctcgatgggctgtcaccaaccgtacc
aacgtagcgaagattttggaagcgactggcacgtccatcacttccaagggcaattactac
gcgcctggcactgcccctggaccagaagaacctgcgaagctgtacattttggtagaagga
gacacggagatcgctgtgtctagtgccatgaaggagctctcgcgtcatctgacagaaggt
accctcgccgctcaggatgtggaggctcgtggtggtactggcggtcgctacaaggtcatc
tga
DBGET
integrated database retrieval system
