Fulvia fulva: CLAFUR5_10497
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Entry
CLAFUR5_10497 CDS
T08195
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ffu
Fulvia fulva
Pathway
ffu03013
Nucleocytoplasmic transport
ffu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLAFUR5_10497
09122 Translation
03013 Nucleocytoplasmic transport
CLAFUR5_10497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_10497
03041 Spliceosome [BR:
ffu03041
]
CLAFUR5_10497
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CLAFUR5_10497
Spliceosome [BR:
ffu03041
]
Complex C
Other components
EJC/TREX
CLAFUR5_10497
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CLAFUR5_10497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
71990375
NCBI-ProteinID:
XP_047764482
LinkDB
All DBs
Position
7:complement(3428078..3430006)
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AA seq
642 aa
AA seq
DB search
MAATSAAELEPVVRVSARLRALLEHARSVKAETTVEPPLPTTELTTGVEALHDDFDETHE
QTTRFLAVETASRQLFYSLITSFQIQQPGFVEVWNLLDIILVCGDHGKCTPELVVWLVEE
LLDSQTTHGCRTVFDFLDSRRDRLAQKDFHKKNLVFLRSCNELLRRLSRAEDAIFCGRVF
FFLFQTFPLGDKSSVNLRGEFHTENTTRFDVTEQSTYGERMDIDPKAGESVGKEATPRGT
PQPAGPENLGGKAVPVKAPTKRTAEEEILSSNELYPIFWRLQHDFSDPTRLFNDGNFVLF
KKGLASSIAKFQKTATVVQTRSGEDDRRGTKRKMDEDGINPDASEHLVDNYNPKYLTSRD
LFELELSDLAFQRHILVQALILIDFLLSLTEQAKKRLVELPTPNKSMLHTFTLSEEDTKW
SKSTRTVIADYLRSTADGAQYHRMVETVLARDKNWVRWKIESCPSIVRGPVTTEQELAAR
KGARSAVRPRVVPDKPNGAMDLSFLDEGTGGGLEVLKDPSRYTAPTIEQLVEAVKTDKLD
LDFAADDEEKTSFENAMQNAKWRALRQARSSNLSLLEKDEPGKALEDVMRIPDHVGDEAG
EQDGEDAVTAIATSSTAETTESYAKESSMEAEVPPQVAGDLQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacttctgctgctgaactggagccggtggtcagagtgagcgctcggcttcgc
gcgttacttgaacacgcgagaagtgtcaaagcggagaccacggtggagcctcctctgcct
accaccgaattgacaacgggcgtcgaagcattgcacgatgacttcgatgaaacgcacgag
cagaccacgcgatttctggctgtagagaccgcatcccgccagctgttctattctcttatc
acatccttccaaatacaacaacccggcttcgtggaagtctggaatctgctggacatcatc
ttagtctgtggcgaccatgggaaatgtacgcctgagctggtggtatggctagtggaagaa
ctactcgatagtcagaccacccacggctgccgcactgttttcgacttcctggactcacgt
agggatcggcttgcgcaaaaggactttcacaagaagaatctggtgttcctccgatcttgc
aacgagcttctcaggcgactgagcagagctgaagatgcaatattctgtggacgggtgttc
tttttcctctttcaaacatttccactgggcgacaagagctcggtcaatcttcgaggagaa
ttccacaccgagaacacgaccagattcgacgtcacggagcaatccacatatggagagcgc
atggatattgacccaaaagccggtgaatccgtcggcaaagaagctacaccacgaggaaca
ccacagcctgctgggcctgagaatctgggcggtaaagctgtccccgtcaaagcgccaacg
aaaagaaccgccgaagaagagattttatcatcaaatgaactgtatccaatcttctggaga
ctgcaacatgacttttctgacccaacgagactcttcaacgacggcaatttcgtgctattc
aagaaaggtcttgccagcagtatcgcaaagttccagaagacagccacagtcgtccaaacg
aggtcgggagaggacgataggcgtggaacgaagcgtaagatggacgaggatggcatcaac
cctgacgcaagtgagcatctcgtggacaactacaatcccaagtatctcaccagtcgggat
ctgttcgagctggagcttagcgaccttgcctttcaacggcatattctcgtgcaggcactc
atactcatcgactttctactgtctttgacagagcaggcgaagaagcgactggtcgagctg
ccaactcccaacaagtcaatgctccatacttttaccctcagcgaggaagacaccaaatgg
tcaaagtcgactcggactgtcatcgcagactaccttcgctctactgccgacggggcgcag
tatcatcgtatggtggagaccgtgctagcgcgtgacaagaactgggtgcgctggaaaatc
gaaagctgcccatccattgttcgaggtccggtgactactgaacaagagcttgcagcgagg
aaaggcgcgaggagtgcggtaaggccgcgagttgtccctgacaagcctaatggcgcgatg
gacctgagctttcttgacgagggcaccggtggtgggcttgaagtcctcaaggatccttca
cgttacactgcgccaacgatcgagcagttggtggaagcagtcaagactgacaagctcgac
ttggattttgctgccgatgacgaggagaagaccagcttcgagaacgcgatgcagaacgcg
aagtggcgggcgctgagacaagcacgatcttcgaacctgagtttgctggagaaggacgag
cctggcaaagctttggaagatgtgatgcgcatacctgatcatgtcggcgacgaagctggt
gagcaggatggggaggatgcggttaccgccatcgccacgtccagtacggccgagactacg
gagagctatgcaaaggagtcgtcgatggaggctgaagttccaccacaagtggcaggagac
ttacaatga
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