Fulvia fulva: CLAFUR5_11455
Help
Entry
CLAFUR5_11455 CDS
T08195
Name
(RefSeq) uncharacterized protein
KO
K14328
regulator of nonsense transcripts 3
Organism
ffu
Fulvia fulva
Pathway
ffu03013
Nucleocytoplasmic transport
ffu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLAFUR5_11455
03015 mRNA surveillance pathway
CLAFUR5_11455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_11455
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CLAFUR5_11455
mRNA cycle factors
P-body specific factors
CLAFUR5_11455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
71991333
NCBI-ProteinID:
XP_047765035
LinkDB
All DBs
Position
8:3234643..3236280
Genome browser
AA seq
545 aa
AA seq
DB search
MPPKVLAKNNDRANGVLPVTAATRAAATTKGPAPRLKLEIRRLPPGLTLTEFEETLGDEW
KLGNGKVDWREYKQGKVKLGLGKMPEQSRCYIHVANEGLVKDLEQRFLAVIFTDKAGTHK
NPDLKHLPPVLEFAMNQRTPLTTKARVDSRQGTIDQDPEFMTFLMAETEPITKAAALDAV
GVEKKEGDKVEVKTTPLIEALRDKKANKAKAAESKAAEKKDAKGHARTESKDAVPAKADA
KDDKNAKQKVDQASKEAVKALNKQVANKQQQAQQRPASPLPPTAKNASPAKTKKAAQNTS
QSPKPQNATPTQPGVKNAPTGPAAAAQTPGQRPPREPRQRGGVDGIKKMLQKDLGIKPKP
APTAGQPGSAGSSTPASPAPNNRNTQQQKQPASPAPAAPANMKTPPTAPKAQQQAQPVPT
AHLTKAYLKHAIPSQGMTEMLIQQALSQYGQVKSVTIDPRKGTAIALFKDNESLKKAIEA
KRVPVAQGTVEILEFKDRPAGGGPARGGFRGGRGGRGGARGGAQSAASSVPPAAAPAASK
PNDGA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaaagtactggccaagaacaatgaccgggcaaatggagtcctgccagtcaca
gcggcaacacgcgccgcagccactaccaaagggccagcaccacgactgaagcttgagata
cggcggctgccaccaggacttacactgaccgaattcgaggagacgttgggcgatgagtgg
aagctaggcaatggcaaggtggattggcgggagtacaagcagggcaaggtcaagctcggc
ttgggcaagatgccggagcagagcagatgttacatccatgttgcgaacgagggcctagtg
aaggatttggagcagagattcctcgcagtcatcttcacggacaaggcaggcacccataag
aacccggacctgaagcacttgccgccagtacttgagtttgcgatgaaccagaggacaccg
ctcaccacgaaggcacgagtcgacagtaggcagggcaccatcgaccaggatccggagttc
atgacgttcttgatggcagaaacagagcccattacgaaggcagcagctctcgatgctgtg
ggcgttgagaagaaggagggtgacaaagtcgaagtcaagacgactccgctgatcgaagca
cttcgcgataagaaagcgaacaaagccaaggcagcggagtcaaaggctgctgagaagaag
gatgctaagggacatgccagaacagagagcaaagatgcggtccctgcaaaagcggatgcg
aaagacgacaagaacgccaagcagaaggtagatcaggcttcaaaggaggctgtaaaagcg
ctcaacaagcaagttgccaacaagcagcagcaagcacaacaacgtccagcctcacctttg
ccacccacagcgaagaatgcatcgcccgccaagacgaagaaggcggcgcagaatacgtct
caatcaccaaaacctcaaaatgcgacgcctacacagccaggcgtcaaaaatgctcccact
gggccagctgctgcggcgcaaactccgggtcaacgtccgccaagagagccaaggcaacga
ggaggtgtcgatggcatcaagaaaatgcttcagaaagacctcgggatcaagccgaagcct
gcacccacagccggacagccaggaagcgctggatcctcaacaccagcatcacccgcaccg
aacaatcgcaacacacagcaacagaagcaacccgcgtcgccagcgccagcagcaccagcg
aatatgaagacaccacccactgcaccgaaagcacaacagcaggctcaacctgttcccacc
gcgcatttgaccaaagcatatctcaagcacgcaattccaagtcaaggcatgacagagatg
ctcattcagcaagctctgtcgcagtatggtcaagtcaagagtgttacgatcgatccgcgg
aagggtactgcaattgcactgttcaaagacaacgaaagcttgaagaaagccatagaagca
aaacgtgtgccggtcgcgcaaggtactgtcgagatccttgaattcaaagaccgaccagcg
ggaggtggtcctgctcgaggtgggttcagaggcggacgaggagggcgtggtggagcaaga
ggtggagcgcagtctgctgcgtcgtcggtgccacctgcagcagcaccagcagcgtcgaag
ccaaatgacggagcatga
DBGET
integrated database retrieval system