Fulmarus glacialis (Northern fulmar): 104074928
Help
Entry
104074928 CDS
T08370
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104074928 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fga03400
]
104074928 (LIG4)
Enzymes [BR:
fga01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104074928 (LIG4)
DNA repair and recombination proteins [BR:
fga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104074928 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Tox-REase-9
SKA1
ATG17_like
Motif
Other DBs
NCBI-GeneID:
104074928
NCBI-ProteinID:
XP_009573527
UniProt:
A0A093ILW5
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASAPALQPSKKTVASQVPFADLCSTLERIQTCKSRPEKTKYFRDFLDAWRKFHDALHQK
EKDITDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPA
GSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLIS
QSTALEQKWLIRMIIKDLRLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLS
DVSIMLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFVHSVFKSDIRNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSNVFTPVTGRIHVVHKKRAGTRKEVID
ALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAETPPPNEKPTIFRSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPC
NILCGIEKPEMYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMTS
DMLADLRSKAEGKLASKHLHIDEYDEPQEKKRKTVSKVRKIIGIAEQFKAPDLSNVSKVS
NVFEDVEFCVMTGTGKYSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIASN
KYDVVRAEWLLQCFQTKVLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTADTDVAQLKE
VFSRMKDSKVMPLDTIAELEERYSWNSCQLNIFRGNTIYVDCYAVVNEPKTKIRGTTLSI
RALELRFYGAKVVSHLEEGISHVVIGEDHSRVKEVKTLRRTFGKKFKIVSELWVTESVKE
GVPKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcacctgctttgcagccttctaaaaaaaccgtagcctctcaggtccctttt
gcagatctgtgctctactctggagcgaatacagacatgtaaatctcgtccggagaaaacc
aagtatttcagggatttcctggatgcctggagaaaattccacgatgctcttcatcaaaaa
gagaaagacatcacggattctttttatccagctatgcggcttattcttccacagttggaa
agagaaaggatggcctatggaattaaagaaactatgcttgcgaagctgtatattgaactg
cttaatctaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacacctgct
ggctcacgtggagatgctggagattttgcaatgattgcatacttcgtgttaaaacctagg
agcccaaaacaaggcagactgacaatagaacaagtcaatgaacacttagatgcaatagct
aataataatgctgctaaaaacaagggtcttttaaagaaaagtctccttcaattaattagc
cagagcacagcactggaacaaaaatggctcatccggatgattataaaggatctgaggctt
ggtgttagtcaacaaactatattttccatttttcatcctgatgctgctgagttacacaac
gtcacaactgatttggaaaaagtttgcagacagctgcacgatccctctgtctcactcagt
gatgtttctatcatgttgttttctgcctttaaaccaatgcttgctgctattgctgatgtc
cagcagattgagaaacaaatgaataaccagatattctacatagaaactaagctggatggt
gagcgtatgcagatgcacaaagatggagatgtatataaatatttttcccgaaatgggttt
gactatactcagcagtttggtgcttccccccttgatggttcattaacaccctttgttcat
agtgtatttaagagcgatatacgaaattgcattctcgatggtgaaatgatggcttacaat
cccgagacgcaaacctttatgcaaaaaggaaacagatttgacataaaaagaatggtggag
gactctgatctgcagacatgcttctgtgtgtttgatgtattgatggttaacgatcagaag
ttgggtcacgaagtattaagcaaaagatatgaaatcttaagtaacgtatttactccggta
acgggcaggatacatgttgtacataaaaaacgtgctggaacgagaaaagaagtaattgat
gctttaaatgaagcaatagataacagagaggaagggattatggtgaaagatcccatgtcc
acctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatacgtcagt
gggctgatggatgaactagaccttttaattgtcggtggttactggggaaagggctcacgt
ggtggaatgatgtctcattttctgtgcgctattgcagagacgccccctccaaatgaaaaa
cccaccattttccgctctatttgtcgtgttggctctggctatactatgaaggagttgtat
gatttaggtttgaaactggctaaacactggaagccctaccataggaaggaccctccctgt
aacattttgtgtggaattgaaaaacctgaaatgtacattgaaccttgcaactctgtcata
gtgcagatcaaggcagccgagattgttaacagtgatatgtacaaaactgactgtactttg
agattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgacttca
gacatgttagcagatctcagaagcaaagcagaagggaagctggcatctaagcaccttcat
atagatgagtatgatgagccacaagagaaaaaaaggaaaaccgtatcaaaggtgaggaag
ataattggaatagctgagcagtttaaagctcctgatctttctaacgtaagcaaggtttca
aatgtatttgaagatgttgagttttgtgttatgacaggaacgggaaaatactcaaagtcc
gaactggaaagcagaattgccgaatgtggtggcagcgtggtgcagaacccggggccggag
acttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcttccaac
aaatacgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaagtgctggtg
ccttggcagccagcctttatgattcacatgtctcctgacacaaaagaacattttgctcgt
gagtatgattgttatggagacagctacacagcagatacagatgttgcacaactcaaggaa
gtgttctcaagaatgaaagacagtaaggtgatgcctttggacacgattgcagagttagaa
gaacgttattcatggaacagttgtcagctcaatatattcagaggaaacactatttatgtg
gactgttacgctgttgttaatgagcccaaaaccaaaatccgtggaacaacactatcgatt
agagctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggcatc
tcccatgttgttataggagaagatcattcccgggtaaaagaggtgaaaacactccggaga
acatttgggaaaaaatttaaaatcgtatctgagctgtgggtaacggagtcagtgaaggaa
ggagtcccaaagaatgaaaatcagtacttaatttaa
DBGET
integrated database retrieval system
