Fulmarus glacialis (Northern fulmar): 104082808
Help
Entry
104082808 CDS
T08370
Symbol
CHD4
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104082808 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fga03036
]
104082808 (CHD4)
Chromosome and associated proteins [BR:
fga03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104082808 (CHD4)
Chromatin remodeling factors
NuRD complex
104082808 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHDCT2
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
ResIII
DEAD
PHD_2
Motif
Other DBs
NCBI-GeneID:
104082808
NCBI-ProteinID:
XP_009584351
LinkDB
All DBs
Position
Unknown
AA seq
1924 aa
AA seq
DB search
MASGIGSPSPCSGGSDDDEMEILLNNAIPQHPEPEEEPEEELLSEAETPKIKKKKKPKKL
KEPKVPKLSKRQKKELGDSSGEGNEFVEEEEEVLRSDSEGSDYTPGKKKKKKLGPKKEKK
NKAKRKEEEEEEEEDDDSKEPKSSAQLLEDWGMEDIDHIFTEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTNVDAV
LPQPPVDVPLRKAKTKEGKGPNARRKPKASPRIPDIKKPKTKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLKAGKKKKKGEEDATVAVDGYE
TDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKED
NSEGEEILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNG
EWLCPRCTCPALKGKVQKILIWKWGQPPVGPPPPRPPDADPNAPPPKPLEGRPERQFFVK
WQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNKDPKYA
EMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVDIQDYDL
YKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTL
HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLST
IINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFH
VLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQ
NNLEELFHLLXXXXXXXXXXXHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVF
KNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPY
LFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLE
DFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVII
YDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGL
GSKTGSMSKQELDDILKFGTEELFKDEATEGGDNKEGEDSSVIHYDDKAIERLLDRNQDE
TEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQ
QQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAA
RRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWL
VRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRK
KVQEFEHVNGRWSMPELAEIEENKKLSQPSSPSPKTPTPSTPGDTQPNTPAPVPPPEEGV
KVEEGASAKEQGESSEPEKELSASATETEVPMECAQPVETPPQEAKSPVNPTEADEKKVE
EPEVKERPDEPMEVESKGISXGADVEKVEDRAPTENPPEPPIITLDEKDEKKDDDKRDVV
MLQNGEMLKESVDERHKKAVKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRR
HDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQA
LVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNNPANAVLHK
VLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRSSEPPPPPPPQQV
AQQQ
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggcattggatctccatcaccgtgctcagggggcagcgatgatgatgagatg
gagatcctgttgaacaacgctatcccccagcatccagagcctgaagaagagccagaagaa
gagcttctgtcagaggctgagacacccaaaatcaagaagaagaagaagcccaagaaacta
aaggaacccaaagtgcccaagctcagcaagcgtcagaagaaggagctgggggacagctct
ggtgaggggaatgagtttgtggaggaagaagaggaggttctgcgctctgacagtgagggt
agtgattacactcctgggaagaagaaaaagaagaaattagggcccaagaaggaaaagaaa
aacaaagccaagcgcaaggaggaggaggaagaagaggaagaagatgatgactcaaaggag
ccaaagtcatctgctcagctcctggaagattggggcatggaggatattgatcatatcttc
acagaggaggattaccgcactctcaccaactacaaagctttcagccagtttgtcaggcca
cttattgcagccaagaaccctaaaatagcagtgtcgaagatgatgatggtactgggagcc
aaatggagggagtttagcacaaacaaccccttcaagggaagttcaggtgcatctgtggca
gctgctgcagctgcagctgttgcagtagtggaaagtatggtgacaaatgtggatgctgtc
ctgccacagccccctgtagatgtgccactcaggaaagccaagacaaaggagggcaaagga
cccaatgcccggcggaagccaaaggccagtcctcgtattcctgatatcaagaaacctaaa
acaaagaaggtggcacctttgaaaatcaaactgggaggatttggttccaagcgtaaaaga
tcatcaagtgaagatgatgatctagatgtggagtcagactttgatgatgccagcatcaac
agctactctgtttcagatggatctacaagccgtagtagccgcagtcgcaaaaaactcaaa
gctgggaaaaagaaaaagaaaggtgaagaggacgccacagtggctgtggatggctatgag
actgatcaccaggactactgtgaggtgtgccagcagggaggagaaattatactgtgtgat
acctgccctcgtgcctaccacatggtttgcctggacccagacatggagaaagccccagag
ggcaaatggagctgcccacactgtgaaaaagagggcattcagtgggaagcaaaggaggat
aactctgaaggtgaggagatcttggaggatgttgtgggggatgctgaggaagaggatgac
caccatatggagttctgtagagtctgcaaggatggaggagagctgctgtgctgtgatgcc
tgtccttcatcctatcacatccactgtctgaatcccccgttgccagagattcccaatgga
gaatggctgtgtcctcgctgcacttgcccagctttgaaaggaaaggtgcagaagatcttg
atctggaaatggggtcagcccccggttggccccccaccaccacgtccacctgatgcagac
cctaatgctcctccccctaagcctctggagggtcggcctgaaaggcagttctttgtcaaa
tggcagggcatgtcctactggcactgctcttgggtgtcagagttgcagctggagctgcac
tgccaggtcatgtttcgtaactaccaacgcaaaaatgatatggatgagccgccctcgggg
gacttcggaggggaagaagagaaaagccgaaagagaaaaaacaaggaccccaaatatgct
gagatggaggagcgcttctatcgatacgggatcaagcctgagtggatgatgatccacaga
atccttaatcatagtgtggataagaaggggaatgtccactatttgattaaatggagagac
ctgccctatgaccaagcatcctgggaaagcgaagatgtggatatccaagattatgacctc
tacaagcaagcctactggaatcacagggagctgatgagaggtgaagagggcaggcctggt
aagaagttaaagaaagtgaagatgcggaaactggaaagaccccctgagactcccacagta
gatccaacagtgaaatatgaccggcaaccagagtacctcgatgtaacaggggggaccttg
catccctaccaactggaaggactgaactggctgcgcttctcttgggcccagggcacagat
acaatcttggctgatgaaatgggtctgggaaagactgtgcagacagctgtgttcctatat
tccttatacaaagagggccactcaaagggtcccttcttggtgagtgccccactatccaca
atcatcaactgggaacgagaatttgagatgtgggccccagatatgtatgtagtgacctac
gtcggggacaaagacagccgggccatcatccgtgagaatgagttcacttttgaggataat
gccatacgcggaggcaaaaaagcatccagaatgaagaaggaggctgctgtgaagtttcac
gtgcttctcacctcctacgaactgatcacaattgatatggccatactaggctctattgac
tgggcctgtctcattgtggatgaagctcacagactgaagaacaatcagtctaagttcttc
cgtgtgctgaatggttactccctccagcacaagctgctgcttacaggaactcccctgcag
aacaacctggaagaactgttccacctgctgaannnnnnnnnnnnnnnnnnnnnnnnnnnn
nnncataacttggagggcttcctagaagagtttgcagatattgccaaggaagatcagatc
aagaagctgcatgacatgctgggcccacacatgctgaggcgtctcaaagctgatgttttc
aagaatatgccatctaagacggaacttattgtcagggtggagttgagccccatgcagaag
aaatactataagtacattttgacaagaaactttgaggcactgaatgcacggggtggtggt
aaccaggtctccttgctcaatgttgttatggatctgaagaagtgctgtaaccacccctac
ctctttcctgtggctgctatggaagctccaaaaatgccaaatggcatgtatgatggtagt
gctcttattcgagcctctggaaagctgctgctgctccagaagatgttaaagaaccttaag
gaaggaggtcacagggtgcttatattctctcagatgactaaaatgttggaccttctggaa
gactttttggagcatgaagggtataaatatgagcggattgatggaggaatcacagggaac
atgcgtcaggaggctattgatcgcttcaatgctcctggtgctcagcagttctgctttctg
ctttcaactcgagctgggggtcttggtattaacttggccacagcagatactgtgattatc
tatgactcagactggaacccccacaatgatatccaggccttcagtcgtgcacacagaatt
ggacagaacaagaaagtgatgatataccgctttgtgacaagggcctcagtggaggagcgt
atcactcaggtggccaagaagaaaatgatgttaactcatctggtagtgagaccagggttg
ggctccaagacaggctccatgtccaaacaggaacttgatgacattctcaaatttggcact
gaagagctcttcaaggatgaggctactgaggggggggataacaaagaaggtgaggacagc
agtgtcatccactatgatgacaaagcaattgagcgtctgttggatcgaaaccaggatgaa
acagaagatacagaacttcagggcatgaatgagtatctcagctccttcaaggtggcccag
tatgtggttcgtgaagaggagatgggggaggaagaggaggttgaacgggagatcattaag
caggaggagtcagtggatcctgattactgggagaaactgctgcgtcaccattatgaacag
caacaggaggatctggccaggaatctgggcaagggcaaacgtattcgcaagcaagttaac
tacaatgatggctcgcaggaggatagagactggcaggatgaccagtcagataatcagtca
gactattcagttgcttctgaagaaggagatgaggactttgatgagaggtctgaagcagct
cgtcggcctagccgcaaaggcctgagaaatgataaagataagcctctgcctcccttactt
gcccgtgtgggagggaacattgaggtcttgggtttcaatgcccgccagcggaaagccttc
ctcaatgctatcatgcgctatggaatgccgcctcaggatgccttcaccactcagtggctt
gttcgggacctccgtggcaagtcagagaaagagttcaaggcctatgtgtcgctgttcatg
cgccatttatgtgaacctggagctgatggtgcagagacctttgcagatggggtcccacgg
gaaggtctttctcgacagcatgtccttactcgcattggggtcatgtcacttatacgcaaa
aaggtgcaggaatttgagcatgtgaatggccgttggagtatgccagaactggcagagata
gaggagaacaagaaactttcacagccaagctcaccctcccccaaaactccaactccttcg
acgccaggggatacacagccaaatacgcctgcccctgtccctccacctgaagaaggagta
aaagtagaagaaggagccagtgctaaggagcaaggagagtcatctgaaccagagaaagag
ctcagtgcctctgctactgaaacagaggtccctatggagtgtgcccagcctgtggagaca
ccgccacaggaagcaaaatccccagtgaaccccacagaagcagatgaaaaaaaagtagag
gaaccagaggtgaaggaaagaccagatgagccaatggaagtagaaagcaaaggtatctcc
tagggagctgatgtggagaaagtggaagacagagcgcctactgagaatccccctgaacct
cctataatcactctggatgagaaagatgagaaaaaggatgatgataagagagatgtggtg
atgctgcagaatggagagatgctgaaagagtcagtagatgaaaggcacaagaaggcagta
aagcagcgcttcatgttcaacatagcagacggtggcttcactgaactacactccctgtgg
cagaatgaagagcgggctgcaactgttacaaagaagacctacgagatctggcatcggcgt
catgactactggctgcttgctgggattatcaatcatggctatgcccgttggcaggatatt
cagaatgatccacgttacgccatcctcaatgaacccttcaagggtgagatgaacaggggt
aacttcctggaaataaagaataagttcttggcaaggagatttaagctcctggagcaagcg
ctggtgatcgaggagcagttgcggcgagctgcctatctgaacatgtcagaagacccatct
catccatctatggctctgaacacacgttttgcagaggtggaatgcctggctgagagccac
cagcacctatccaaggagtcaatggctgggaataacccagccaatgctgtgctgcacaaa
gttctgaagcagctggaggagcttttgagtgacatgaaggcagatgtgactcgtttgcct
gccaccattgcccgtatcccacctgtggctgtgcgcctccagatgtctgagcgcaacatc
ctcagccggctggccaaccgcagcagtgagccccccccaccgccacctccccaacaagtg
gcccagcagcagtga
DBGET
integrated database retrieval system
