Fusarium graminearum: FGSG_00780
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Entry
FGSG_00780 CDS
T01038
Name
(RefSeq) histone deacetylase RPD3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03082
ATP-dependent chromatin remodeling
fgr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
FGSG_00780
03083 Polycomb repressive complex
FGSG_00780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fgr03036
]
FGSG_00780
Enzymes [BR:
fgr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
FGSG_00780
Chromosome and associated proteins [BR:
fgr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
FGSG_00780
HDAC complexes
Sin3A-HDAC complex
FGSG_00780
BRAF-HDAC complex
FGSG_00780
REST complex
FGSG_00780
SHIP complex
FGSG_00780
MiDAC complex
FGSG_00780
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
FGSG_00780
Heterochromatin formation proteins
Other heterochromatin formation proteins
FGSG_00780
Chromatin remodeling factors
NuRD complex
FGSG_00780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
23548255
NCBI-ProteinID:
XP_011316491
UniProt:
I1RB73
LinkDB
All DBs
Position
1:complement(2523923..2526039)
Genome browser
AA seq
649 aa
AA seq
DB search
MGDDIRVELGSVALNASSPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQ
KMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSFMREQGKYNVGDDCPVFDGLFEF
CGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFKKR
VLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDTGIGQGKNYAVNFPLR
DGITDASYRSIFQPVIENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNFVK
SFNLPTLVLGGGGYTMRNVARTWAFETGVLVGKEMDRTLPYNEYYEYYAPDFELNVRSSN
MENSNSREYLEKITSSVIDNLRQTGPAPSVQLQDVPRKPFGGMTDEEEAELDDLDEDENK
DVRMTEHRWDKHVEHDNEFEASDDDEMARVNGATRQNGNKRSFTDYRKGEMDVDNPDAPP
AKAPNGASNDEAAEEHTGEDGHDVNDDTIDDISAPDQPEKDQPEKATETPTENAKEPELS
KVDGDGDVGMEDSAVEETTIKKEDVEPEAPEAPTEPSAPTEKSAQDEPTVEAAANDAATT
EPIPEPTPAEKPAESTEKAQSEQPADAMDVDTEKDKPEQPKEKSKSPAN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgacattcgtgttgagctcggctcagtcgcgctcaatgcctcatcgcccaag
aaggttgcttacttttacgattctgacattggtaactatgcctacgttactggccatccc
atgaagcctcatcgcattcggctggcgcatagcttgatcatgcagtacaacctgtaccag
aagatggagatttaccgcgcgaaacctgcgacccgaggcgaaatgacccaatttcacacg
gacgactacatcgacttcctgcaaaaagtcacgccagacaatatggacagcttcatgagg
gagcaaggaaaatacaacgtcggagatgattgccctgtatttgacggtctcttcgagttt
tgtggtatcagtgcgggcggtagcatggagggcgctgcgcgactcaaccgccaaaaatgc
gacatcgccatcaattgggctggtggtctgcatcacgccaaaaaatgcgaagccagtggt
ttctgctacgtcaacgatatcgttctcggcatccttgagctcctccgattcaaaaagcgg
gtcctctacatcgatatcgacgtccatcacggtgatggtgttgaggaagccttctatacc
accgaccgtgtcatgactgtttctttccacaagtatggcgagtacttccctggtactggt
gagctgagggataccggtattggccaaggaaagaattacgctgtgaatttccctcttcga
gatggtatcaccgatgcgtcataccgctcaatcttccagcctgtcattgagaatgtcatg
aagtattaccagcccgaggctgttgttcttcagtgtggtggtgacagtctttcaggtgat
agactgggttgtttcaacttgagtatggatggtcacgccaactgcgtgaactttgtcaag
agttttaacctccctacccttgttctcggtggaggtggctatacaatgcgaaatgtcgcg
cgtacatgggcatttgaaactggtgttcttgtcggcaaggagatggaccgaacattgccg
tacaatgaatactacgaatactatgctcctgactttgagctgaacgtccgatcctcaaac
atggagaactccaacagccgagaatatctcgagaagataacttcatcagtcattgataat
ctccgacaaactggacccgcgccgtcagtgcaactgcaggacgtcccacgaaaacctttt
ggcggcatgaccgacgaggaggaagctgagctggatgatctcgatgaggacgagaacaag
gatgtccgcatgacggaacaccgctgggacaagcatgttgaacatgacaacgagtttgaa
gccagcgacgatgacgagatggctcgcgtcaatggtgctactcgccagaacggtaacaag
cgcagctttactgattaccgcaagggagaaatggatgtcgataaccccgacgccccccct
gctaaagcccccaatggtgcttctaatgatgaggctgccgaggaacacactggcgaggac
ggacacgatgtgaatgacgatactatcgatgacatttcggctcccgatcagcctgagaaa
gaccaaccagagaaagcgaccgaaacccctactgagaatgcgaaggaacccgagctatca
aaggttgatggagatggcgatgtgggtatggaggactcagcagtcgaagagacaaccatc
aagaaggaggatgttgagcctgaagcacctgaagcacccactgaaccttcagcgccaaca
gaaaagtctgcacaggacgagccgactgtcgaagcggcggctaacgacgctgctactaca
gaaccaatcccagagccgacacctgccgaaaagcctgcagagtcaactgagaaagctcaa
agcgaacagcctgccgatgctatggacgttgacacggagaaagataagccagagcaaccc
aaggagaagagcaagagcccagcaaactag
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