Fusarium graminearum: FGSG_01024
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Entry
FGSG_01024 CDS
T01038
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_01024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_01024
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGSG_01024
Spliceosome [BR:
fgr03041
]
Complex A
U2 snRNP components
U2 related factors
FGSG_01024
Complex B
FGSG_01024
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
23548481
NCBI-ProteinID:
XP_011316778
UniProt:
Q4IP34
A0A1I9EXG6
LinkDB
All DBs
Position
1:complement(3360180..3363917)
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AA seq
1207 aa
AA seq
DB search
MARPRDSRSPSPAGSTHSSRRFRNDDRRDRDRRNDGRDHRRRTRSRSPDPRNRDRDRDRD
RDRARDRDNYRRRDRSLDRRDDNHYRGGRRDNRERDRRRSRDRFDDRIRSPMTDRRRNRS
RENDRDVRRRDDSRSRISGRREGTTDSPARSNRDDGRNQKTPLDDSGNGGASQVRHTLLD
FECIADGLQAQTPKAEGGQADVDKKAERLAKLEAWKKKKESASQKQKEVNPSQTRNLLAE
MDKKASGASSKTVSPSVSAIASPAATPTVESPAASYSGKFDPKAIAKKSAASRAHDASKP
ALGSLEGQPEKISVPVKQATTASALPANRTKASGFGFVKTNAETEKLTAKRKLDLDEEDT
TKRKLTKLPALPIEADDTPYADQDDDESDGDNFAENEEEAAAAARAAHERRLQAENQMDT
AEEETKPTDVETNGDVAMNNNASQPEPATQMEVDEEDDVDPLDAFMADLKQTDVRQPTKT
STTQKIQEPEAYFSDDEYDFNKKDEGDASALLAITAKRKKKDIPTIDYSKIEIEPIRKNF
WHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKP
TPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTR
ELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQG
RVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVL
KNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGELYDRDEDARTLIFVERQEKA
DDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVI
NYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAPGIAKALEQSGQPIPDRLNEM
RKAHREKVKSGKAKDTSGFGGKGLDRLDQEREAARLRERKVHKAEGEEEEVTEDKKEDED
EKAEKALDAIRAAASGVLARESAKADDADAKSMPPVKTSGVVKDKAKDPLDKVSSAVSAI
NSRLGKAGQLRAGQPIDNKGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTSI
TTKGNFYPAGKEVPAGAEPKLYILIEGDTEVVVSSALTELTRLLREGTIAAVDADSRAPA
SGRYTIT
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaccgagagactcgcgctcaccaagtcctgcaggcagcacccacagttcccgt
cgtttccgcaacgatgatcgccgggatagggatcgtcgcaacgatggaagggaccatcgc
cggcgtaccagatctcgcagtccagacccccgaaatcgcgaccgagacagagaccgtgat
cgtgaccgcgcacgagacagagacaactaccgccgaagagaccgttccctagatcgacga
gatgacaaccattaccgaggtggacgaagagacaatcgagaacgagatcgtcgaagatcg
cgagaccgctttgatgaccgcattcgatcacccatgaccgaccggcgacgcaaccgcagc
agagagaatgaccgggatgtgagaaggcgagatgattcccgcagccgtatctctgggcgc
cgtgagggtacgactgactctcctgctcgcagcaatcgtgatgatggcagaaatcagaag
acgccactcgatgacagtggtaacggcggtgctagtcaggttcgacacacgcttcttgat
tttgagtgcattgctgatggattacaggcacaaacccccaaagctgagggcggacaagct
gatgtcgacaagaaagctgaacgactggccaagcttgaagcatggaagaagaagaaggag
agcgcaagtcagaaacaaaaagaggtaaaccccagtcagacaaggaatctccttgctgaa
atggacaagaaggcgagcggagcgtcgtccaaaacggtttccccttcagtttctgctatt
gcttcaccggctgcgacgcccactgtcgagtcccccgctgcttcctactctggcaagttt
gatcccaaggccatcgccaagaagtcggcagcttcacgggcgcacgatgcttccaaacct
gcactcggctccctggaggggcagcctgaaaagatttcggtgccggtcaagcaagctacc
actgcatctgcccttcctgcaaacagaacaaaagcaagtggctttggtttcgtaaaaact
aatgcagagaccgagaagcttaccgctaagcgaaagctcgaccttgacgaggaagacaca
accaagcgcaagcttactaaactccctgcccttcctattgaggctgatgacactccgtac
gctgaccaagatgatgacgagtccgatggtgataacttcgctgagaacgaggaggaggcc
gctgctgctgcccgtgcagctcatgagcggcgtttgcaggccgagaaccagatggataca
gccgaggaagagaccaaacctacagatgtggagacgaacggtgatgtggcaatgaacaac
aacgcttcccagcccgaacctgccacccagatggaagttgacgaggaagatgatgtcgat
cctttagatgctttcatggccgatctaaagcagactgatgtgagacaacctaccaaaaca
tcgacaacacaaaagatccaggagcccgaggcctacttcagtgacgatgaatatgacttc
aacaagaaggatgaaggcgatgcaagcgctctgttggccattacagcaaagcggaaaaag
aaagatatcccgacgattgattacagcaagatcgagattgaacctatccgcaagaacttc
tggcatgaaccggctgagttgagtcttcttacggaggctgaggtggctgaccttcgcctc
gaactggatggcataaaagtcaatggaaaagacgttccaaagcctgttcagaagtgggcc
caatgtggtctcacacgccagacgctggatgtcgttgacaacctgggatacgaaaagccc
actcccattcagatgcaagcactcccggctctgatgtctggtcgtgatgttatcggtgtt
gccaaaactggctctggaaagacggttgctttcctgcttcccatgttccgacacatcaaa
gatcagccccctctcaaggatacagatggccctattggattgatcatgacccctactcga
gaacttgccgttcagatccataaagattgcaagcctttcctcaagatgatgggtcttcgc
gctgtttgtgcttatggcggagcccctattcgagagcagattgcagagctcaagcgtggt
gcagagatcattgtatgcacgcctggtcgaatgattgatcttttggctgcgaaccaaggc
cgagtcaccaacttgaaaagagttacgtatgttgtgcttgatgaagccgatcgaatgttt
gacatgggtttcgagccccaggtcatgaagatctttgcaaacatgcgacctgacaggcag
acaatcctcttctcggccactatgcctcgtatcatcgactcgctgaccaagaaggtgcta
aagaaccctattgaggtcacggttggcggacgcagtgtcgtggcaaaggagattgaacaa
atcgttgaagtccgagacgagccgtccaagtttcaccgtgttcttgagcttctcggagaa
ctctatgatcgcgatgaagatgctcgtaccctaatctttgtcgagcgacaagaaaaggcg
gacgacttgctcaaagagctgatgatgaagggatatccatgtatgtcaattcacggaggc
aaggaccagatcgaccgtgattctactatttcggatttcaagaaaggtgttgtgcctatc
ttgattgccacttcggtagcagcccgtggtctcgatgtcaagcagctaaagcttgttatc
aactacgacgctcctaatcatttggaggattatgtgcatcgcgcaggtcgaactggccgt
gctggtaacaccggtgttgctgtcacttttgttacgcccgaacaggagaattgcgctcca
ggcattgccaaggctcttgaacagagtgggcagcccatacctgacaggctcaacgaaatg
aggaaagctcatagagagaaggtcaagtctggaaaagctaaagacacgtcaggtttcggt
ggtaagggtctcgaccgtcttgatcaggaacgagaggcggctcgtctgcgtgagcgcaag
gttcacaaggccgagggtgaggaagaggaggtaaccgaggacaagaaggaggacgaagac
gaaaaggcagagaaggcgcttgatgcgatccgagctgcagcatctggcgtgctggctcgc
gagtcggcaaaggctgatgatgcagatgcaaagtctatgccgccagtcaagaccagtggt
gtagtaaaggacaaggctaaggatccattggacaaagtcagttctgctgtcagcgccatc
aacagccgacttggaaaggccggccaacttcgtgctgggcaacccattgacaacaagggg
cccgatgccggtgccttccacgctacattggagatcaacgacttccctcaaaaggcaaga
tgggctgtcaccaacagaaccaacgtggcgaagattctggaagctacaggtacatcgatc
acgacaaagggcaacttctacccggctggcaaggaggtgcccgctggagccgagcccaag
ctgtatattcttattgaaggtgatacagaagttgtcgtcagttctgccctgaccgaactc
acgcgcttgttgcgggagggcacaattgctgctgtagatgccgatagtcgagcacctgcc
agtggacgatacacaatcacttaa
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