Fusarium graminearum: FGSG_06002
Help
Entry
FGSG_06002 CDS
T01038
Name
(RefSeq) suppressor of stem-loop protein 1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
fgr
Fusarium graminearum
Pathway
fgr03022
Basal transcription factors
fgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FGSG_06002
09124 Replication and repair
03420 Nucleotide excision repair
FGSG_06002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_06002
03400 DNA repair and recombination proteins [BR:
fgr03400
]
FGSG_06002
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FGSG_06002
DNA repair and recombination proteins [BR:
fgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FGSG_06002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
23553149
NCBI-ProteinID:
XP_011324621
UniProt:
I1RPM7
LinkDB
All DBs
Position
3:complement(4005341..4006872)
Genome browser
AA seq
469 aa
AA seq
DB search
MADSDGEYVGDMSDDDLMDHRVSNDNPQATKGKSSKSRKGDSARAWEVSKRTWETGLPDE
DQDGVLSINVLEAEKRKRLLRDTTPLQRGIIRHMVLVLDMSFAMTEKDLLPTRYRLMLSY
AVAFVREFFEQNPISQLGIIGMRDGVAVRVSDVGGNPAEHLDKLKGLESQDPQGNPSLQN
ALEMCRGALFHAPSHGTREVFIIYGALLSSDPGDIHETIGNLITDRIRVSIVGLSAHLAI
CADLCSRTNAGDESQYNIAMDEVHFRELFLAATTPPVTRTVAQSTASLLMMGFPSRTLVP
NGTTSYCACHNRPCREGYLCTRCGARVCRIPSECPSCDLTLILSTHLARSYHHLFPLRNW
IEVPWAKATTSAGCFSCLAPFPEPPKNKGHDKSKEDSGAPKTAKGVSESGRYACEVCGQH
FCIDCDVFAHEVVHNCPGCQSLVSKTDGAAASGEQNGTATHTNGDVAMT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgactccgacggcgagtatgtcggcgacatgtcggacgacgacctcatggaccat
cgcgtctccaacgacaatccccaagcaacgaaaggcaaatcctcgaaatcgagaaaaggc
gactcagctagagcttgggaagtctcgaagcggacttgggagacaggcctacccgacgag
gaccaagacggcgtcctgagtatcaacgtactcgaagccgagaagcgaaagcgactacta
cgcgacacaacaccgctacagagaggaattattcgacacatggtgcttgtgctggacatg
tcgtttgctatgacggagaaggaccttctgccgacgagataccggcttatgctgagctat
gcggttgcttttgtacgagagttctttgagcagaaccccatttcgcagctaggcattatt
ggtatgcgcgatggtgttgctgtcagagtcagcgacgtgggaggaaacccagcggaacat
ttggataagctaaagggattggagagtcaagatcctcagggaaatccaagtttgcagaac
gctctcgagatgtgtcgaggagctctattccatgcgccctcccacggcacacgagaagtc
tttattatctacggcgccctattatcgagcgatcccggcgatatccacgagaccatcggc
aacctcatcacagaccgaatacgcgtttccattgtcggattatccgcccatctggccatc
tgcgcagatctgtgctcacggacaaatgccggcgatgagtcacaatacaatatcgcaatg
gacgaggttcacttccgcgaactcttcctcgcagctacaacgcctccagtgacgcgcacg
gttgcgcagagcacagccagcctgctcatgatggggttcccatcccgaacgcttgttcct
aacgggacgacgagttactgcgcctgtcacaatcggccttgccgcgaaggttatctttgc
acccgttgcggcgctcgcgtgtgccgtatcccctctgagtgcccatcgtgtgatcttacg
cttattctgtcaacgcatctggcccgatcataccaccatctatttccgctaaggaactgg
atcgaagtaccttgggccaaagccaccacctcagcaggctgtttttcatgtcttgcgccc
tttcctgagccaccgaagaacaaagggcacgacaagtctaaggaagacagtggcgcgcca
aagacagccaaaggcgtcagcgagagcggccgctacgcatgtgaggtttgcggacaacac
ttttgtatcgactgtgatgtctttgcccatgaggtcgtccacaactgtccaggttgccaa
agtttagtatcaaagactgatggtgctgccgcatcgggggaacagaatggtacggctacg
catacaaacggcgatgttgccatgacatga
DBGET
integrated database retrieval system
