Fusarium graminearum: FGSG_10087
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Entry
FGSG_10087 CDS
T01038
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03013
Nucleocytoplasmic transport
fgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FGSG_10087
03015 mRNA surveillance pathway
FGSG_10087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_10087
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGSG_10087
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
FGSG_10087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-GeneID:
23557008
NCBI-ProteinID:
XP_011319020
UniProt:
Q4HY71
A0A1I9F466
LinkDB
All DBs
Position
1:complement(9749846..9751489)
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AA seq
488 aa
AA seq
DB search
MADLASRITKPDEVAAETPAETPAETAPAASGELGQADGNIEDLGGSGLQEPEWDVEVSL
SELQNNEATPFHSATTWQDLGLREDLLKGLLSLNFLKPSKVQGKSLPLMLSDPPRNMLAQ
SQSGTGKTAAFVTAILSRVDFSKPDQPQALALAPSRELARQIEGVINAIGRFVENKKVAA
AIPGVLPRGEPVRASVIVGTPGTVMDIIRRRQLDISQLRVLVLDEADNMLDQQGLGDQCL
KVKNMLPKEIQVLLFSATFPENVMKYAGKFAPNAHSLKLQRSELTVKGISQMFIDCPDDN
MKYDILCKLYGLMTIGQSVIFVKTRDSASEIERRMVADGHKVSALHAAFDGAERDNLLTK
FRQGENKVLITTNVLARGIDVSSVSMVINYDIPMKGRGDTEPDAETYLHRIGRTGRFGRV
GVSISFVYDKKSFDALSKIAEMYGIDLVKLDTEDWDEAEERVKEVIKKNRAQASYAPSAT
EPKAAAGA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcttgcgagccgcattacgaaacccgacgaggtcgctgccgagactcccgcc
gagactcctgccgagaccgcacccgctgcttctggtgagcttggccaggccgatggcaac
atcgaagacttgggtggctccggcctccaagagcctgaatgggatgttgaagtttccctc
agcgaactccagaacaatgaagccacaccgttccattctgccactacctggcaagacctg
ggccttcgtgaggacctactgaagggtctcctctctctcaacttcttgaagccctccaag
gtccagggcaagtctctccccctgatgctcagcgaccccccacgaaacatgctggcgcag
tcacagtctggtactggcaagaccgctgccttcgtcaccgcgatattgtcgcgtgtcgac
ttcagcaagcccgaccagccccaagcactggctcttgcgcccagtcgagagcttgcccga
cagattgaaggagtcatcaacgccatcggacgtttcgttgagaacaagaaggttgctgct
gcaatcccaggcgttctgcctcgtggagagcccgtcagagctagtgtcattgtcggtact
ccaggtacagtgatggacattatccgacgccgacagctggacatctctcagctccgcgtt
ctcgtcctggatgaggccgataacatgcttgaccagcagggcctaggcgatcagtgcctg
aaggtcaagaatatgctccctaaggagattcaggtgctccttttctccgccactttcccc
gagaacgtcatgaagtatgccggcaagtttgcacccaacgcgcatagcctcaagttgcag
cgcagtgagcttaccgtcaagggaatctctcaaatgttcattgactgccctgacgacaac
atgaagtatgacattctttgcaaactttatggtttgatgacgatcggccagtcggtcatt
tttgtcaagactcgagatagcgccagcgagatcgagagacgaatggtcgcagatggccac
aaagtctctgccctccacgccgcttttgatggagctgagcgagataacctcttgaccaag
ttccgtcaaggcgagaacaaggttctcattaccaccaacgtcctggcccgtggtatcgat
gtttccagtgtatccatggtcatcaactatgatattcccatgaaggggcgaggcgacacc
gaacccgatgctgagacctaccttcaccgtattggccgaactggtcgatttggccgtgtc
ggcgtcagtatcagcttcgtttacgataagaaaagcttcgatgccttgagcaagattgcc
gaaatgtacggtattgacttagtcaagctggacactgaagactgggatgaggccgaggag
cgtgtgaaggaggtcatcaagaagaatagagctcaagcctcatacgcccccagtgcgact
gagcctaaggctgccgcgggtgcttag
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