Fusarium graminearum: FGSG_10896
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Entry
FGSG_10896 CDS
T01038
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
fgr
Fusarium graminearum
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fgr03009
]
FGSG_10896
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGSG_10896
Ribosome biogenesis [BR:
fgr03009
]
Eukaryotic type
Pre-60S particles
Helicases
FGSG_10896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
23557776
NCBI-ProteinID:
XP_011325484
UniProt:
Q4HVW2
A0A1I9FQL8
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All DBs
Position
3:6329583..6331550
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AA seq
637 aa
AA seq
DB search
MATEKPKKRSPRAWDTLNPPLSEWIRDAVATMGFDQMTPVQAATLPHFMGNKDVVVEAVT
GSGKTLAFLIPLVQKLLRLSEPTKKHHVAAIIVSPTRELAAQIHTVLMKLLQFHEASAEI
LPHLKDDDEKRPFTTVPAIVPQLLVGGTTTTVQDLRFFLRHSPNVLISSPGRLVELMSSP
HVHCPQSSFEVLVLDEADRLLDLGFKPDLQKILSHLPKQRRTGLFSASVSEAVGEIIRVG
LRNPVKIEVKVKIKGGGILEDRKTPASLQMTYMVKPASQKLPALAELLRQLPVRPQRSIV
FLSTCAAVDYFQHILPLILPEGFALVPLHGKHAAKVREKNFNKFLSSVSPTILLTTDLAA
RGLDIPQVDLVVQIDAPSDPKVFIHRSGRAGRAGRKGLAVVMLHPGREEDYVQFLEIRKT
PIAPLEKPTITTSEDDAAEFAKKTRDFVLTDRGLFDKAQKAFVSWARSYGAHQATSIFRA
ADLDWADLGNAWGLLRMPRMPELKGWTGDKMCGLEIDWDNYAYKEKTREQQRKVALEEEK
SGVKKQDKSEEFKRKRKNNEAWSAKHEKEDDRVERREKRRKRRDAEATSKMTDDEKVKQM
ELNDLIAEVRRQNREKAAAEAAAAKQEKDGEFKGFDD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaaaagcccaagaagagaagccctagagcttgggacactctcaatcctcct
ctatcggaatggattcgagatgctgtcgcaaccatgggcttcgaccagatgacgcccgtc
caagctgcaacactgccgcatttcatgggaaacaaagatgttgtagtcgaggctgtcact
ggcagtggaaaaacccttgccttcctcattcctcttgttcaaaaacttctccgacttagc
gaacctacgaaaaagcatcacgtcgccgctataattgtgtcccctacacgagaattggca
gctcagatccatactgttcttatgaaacttttgcaattccacgaggcctctgccgaaatc
ctcccgcatctcaaagacgacgacgaaaagcgaccttttactactgtacctgcgattgtg
ccccaattgctggttggaggtacaacgaccaccgtacaagacctcaggttcttccttcga
cacagccccaatgttctaatttcctcccctggtcgactcgtcgagctcatgtcctcgcct
cacgtacattgtccccagtcctcctttgaggttctagttctcgatgaagccgaccgtctc
cttgatcttggcttcaagcctgatctgcaaaagattctgtcgcatttgccgaaacagcga
agaactggtcttttcagcgccagtgtaagcgaagctgttggagagatcattcgagttggt
ctgcgaaaccctgtcaagatcgaggtcaaggttaagataaagggtggtggtattctcgaa
gacagaaagacgccagctagtcttcagatgacatatatggtcaagcccgccagccagaaa
cttcctgctcttgccgagcttttgcgacaactacctgtacgcccccaacggagcatcgtg
ttcctgtccacttgcgctgccgtcgactactttcagcatattctacctctgatactacct
gaaggttttgctctggtgcctttgcacggaaaacatgcggctaaagtacgagagaagaac
ttcaacaaattcctcagctctgtttctcctacgatattacttactaccgatctggctgct
cgtggattggatattcctcaggttgacttggtcgttcaaattgatgctccttcagacccc
aaggtctttattcatcgcagcggacgagctggtcgtgcgggtcgaaaaggattggcggtg
gtgatgttgcaccctggaagagaagaagactacgttcagtttttggagatccgcaaaaca
ccaatcgcaccgttggaaaagcctaccatcaccacatcagaggacgatgccgccgaattt
gcgaagaagacgagggacttcgtgttaaccgacaggggtctgtttgacaaggctcaaaag
gcattcgtgagctgggctcgaagttatggcgctcaccaggctacatccatcttccgcgcg
gccgatctcgattgggctgatctcggcaatgcatggggactgctacgtatgccccgaatg
cctgaactcaagggctggacaggcgacaagatgtgcggtcttgagatcgactgggacaac
tacgcgtacaaggagaagactcgcgaacaacagcgaaaggtcgctcttgaggaagagaag
tcgggcgtaaagaagcaagataagagcgaggagttcaagcgcaagcgcaaaaacaacgag
gcttggagcgctaagcatgagaaggaagacgatcgagtggagcgaagggagaagcgacgc
aagcgccgtgacgcagaagccacatccaagatgacggatgacgaaaaggtcaagcagatg
gagctaaacgatcttatcgctgaggtccggagacaaaatcgcgaaaaggctgctgctgag
gctgcagcagctaagcaagaaaaggacggcgagtttaaagggtttgacgattag
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