Allofrancisella guangzhouensis: SD28_00560
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Entry
SD28_00560 CDS
T03527
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
fgu
Allofrancisella guangzhouensis
Pathway
fgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SD28_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fgu03400
]
SD28_00560
Enzymes [BR:
fgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD28_00560
DNA repair and recombination proteins [BR:
fgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SD28_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
tRNA_anti-codon
RecG_wedge
AAA_30
RecG_dom3_C
SNF2-rel_dom
SecA_DEAD
IstB_IS21
TsaE
ERCC3_RAD25_C
RMI2
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AJC48259
UniProt:
A0A0A8E2S8
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All DBs
Position
complement(117535..119571)
Genome browser
AA seq
678 aa
AA seq
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MVFLDFVGVGDATVKALTKNGLNLPEELLFVFPKVYKDTRFITSVRDLVVDKKSVIEGRI
TSITYKKTGRKFVRFLVDDGTGVCSVVLFKFYPNQISMLENAEYVRCYGKIVLSQNFQMI
HPEWAVIKNNKCLLEQKLSAVYGVKKVPDKLITNIVTKLLQDKKVKDLIPQACLKSYNLI
KVTDALYYIHALTDSLDERYLSKAKHSVKFEEMLAYKLAEENIKKDLSKTSSPKLILKKN
DIDKFYDKLPYDLTDAQNKAIKQILADIKKTDTMVRLLQGDVGAGKTIVATVALYAAAIS
GYQAAIMAPTEILAEQHYKFLSDYLTDFGIEVIPLLGKLTPKQTKISLDRVKNSPNCIVV
GTHAIFQERVEYNNLGLVVVDEQHRFGVEQRLALIKKGADAKKIAPHQLIISATPIPRTL
AMTLYGNLELSILDELPPNRKPIVTTILNRSKKLDLIVKLKQAIVRKEQIYWVCPLVEES
ESKDFLQDVKTLYSELTVELGDAKVGLVYGSMKSNEKIQVMNDFKAAKYDVLVATTVIEV
GVDVPNASIMIIDNAERLGISQLHQLRGRVGRGSKESYCVLLYSNKISEIGKKRLSLIRQ
SQDGFYLAEKDLEIRGAGDILGKEQSGISTFRTFDINEYYDNYQLISMFAKQIRQDYPEV
VPQLIARWFNQRIIYVDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggtatttctagatttcgtaggagttggtgatgctacggtaaaggctttaactaaaaat
ggtttgaatttaccagaggagttactatttgttttccctaaagtttataaagataccaga
tttataacttctgttagagatcttgtggtagataaaaaaagcgttattgaaggtagaata
acaagtattacttataaaaaaactggaaggaaatttgtacgttttttggttgatgatggt
acgggtgtttgttcagttgttttgtttaagttttatccaaatcagataagtatgctagaa
aacgcagagtatgtaaggtgttatggtaagatagttttatcacaaaatttccagatgatt
catccggaatgggcggtgataaaaaataataaatgtttgcttgagcagaagctatctgct
gtgtatggagtaaaaaaggttccagataagttaatcactaatatagttactaaacttttg
caagataaaaaagtaaaagatttaattccacaagcttgtttaaaatcgtacaatttaatt
aaggttaccgatgctttatattatattcatgctttaacggactccttagacgaacgttat
ctgtcaaaagcaaaacattcagttaagtttgaagaaatgttggcttataagttggctgag
gaaaatataaaaaaagacctttcaaaaacttcatctcctaaacttatcctaaagaaaaat
gatatagataaattctacgataaattaccatatgacttgactgatgctcaaaataaagct
attaaacaaattttagctgatattaaaaagacagatacgatggtaaggctattacaagga
gatgttggagctggtaagactatcgttgcaactgtagctttgtatgctgctgcaatatca
ggttatcaagctgcgattatggcaccaacagaaatcttggccgaacaacattataagttt
ttatcagattatttgactgattttggaatagaggttataccactgctaggtaaattaacc
ccaaagcaaactaaaattagtttagatagggtaaaaaattcaccgaactgtattgtagtt
ggaactcatgctatctttcaagagcgtgttgaatataataatcttggattagtggttgta
gatgaacaacataggtttggggtggagcaaaggttagcactgatcaaaaaaggtgctgac
gcaaaaaaaatagctcctcatcagcttataatatcagcgactcccattcctagaacttta
gcgatgactttatatggaaatcttgagctttctatattggatgaattgccaccaaataga
aaacctatagttacaactatccttaatcgttcgaaaaaattagatctaatagtaaaatta
aaacaagctatagtcagaaaggagcaaatttattgggtttgtccgcttgtagaagaatct
gaaagtaaggattttctacaagatgttaaaacgctgtattcagaacttacagttgaactt
ggagacgccaaagttgggttggtatatggtagtatgaaatccaatgaaaaaatccaagtt
atgaatgattttaaagcagctaaatatgatgttttagttgcaacaacggttatagaagtt
ggtgttgatgttcctaatgcaagtattatgataattgataatgctgaaaggcttgggatt
tcacagctacatcagttaagaggtagagtaggtaggggctcaaaagaaagttattgtgtg
cttttatatagcaataaaattagtgagattggtaaaaaaaggttatctttaattcgccag
tctcaagatggtttttatttagcagaaaaagatttggagatacgtggagcaggtgatatt
ttgggtaaagagcaatctggtatatcgacatttagaacttttgatataaacgagtattac
gataattatcaactaatatctatgtttgctaagcaaataaggcaagattaccctgaagta
gtacctcagctaatagctagatggtttaatcagagaataatatatgtggatgtttga
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