Fusobacterium hominis: H9Q81_07660
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Entry
H9Q81_07660 CDS
T08638
Name
(GenBank) DEAD/DEAH box helicase
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fho
Fusobacterium hominis
Pathway
fho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9Q81_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fho03400
]
H9Q81_07660
Enzymes [BR:
fho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9Q81_07660
DNA repair and recombination proteins [BR:
fho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
H9Q81_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
Helicase_C
TRCF
CarD_TRCF_RID
ResIII
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNM14829
UniProt:
A0A7G9GVJ7
LinkDB
All DBs
Position
complement(1566752..1569742)
Genome browser
AA seq
996 aa
AA seq
DB search
MVEYRGRIPFLLKDHKEKIVYLCSSNRNIEDYNAVLDDVYEGKVLRFESTGNEEEIEKLN
YDFLKLVKSDEKYILLVSLESFLRDYFLEGEKLSFKLGQTIDVSSLENKLIDKKYERNYM
VQERKQFSTRGDIIDIFPADGNLPVRMELSFGDEIERISIFDIETQRSIEKKQSFEMYMD
NNNEKLVSFYDIVKKIKNVKIFIENPELLKYKLEELVLRDRDKESILRSRFNEIKNQGEE
IELKQFSHQDIGRFSDYEYVKDISNESLKKILIMSDEAKRYQEIFKECKNIEFKRYPLYE
GYEEENLLVLTDRELKGVRVRRETKDKISLRYKNVSEIREGDYIIHENYGVGLYLGIEVI
DGHEYLKIKYADEDKLFVPVEGISRIEKYISHPGVTPELYNLGRRGFKRKKEKLYEEMLV
FAKEIIEIQAKRESGNGYKFTLDTIWQEEFEEGFPYNETLSQKQAIEDVKKDMESSKVMD
RVICGDVGYGKTEVAMRAAFKAATDGKQVAIMVPTTILAQQHYNRFCERMKNYPITIELL
SRLKTPAELKKAINAIEQGSTDIVIGTHRLLSKDVKFKDLGLVIIDEEQKFGVKAKEQLK
KYRANVDMLTLTATPIPRTLNLSLLGIRDLSVIDTPPEGRKPVETLFIPTENNEIKNIIM
KEIAREGQVFYIYNFVNGIKYKVQELEKLLPEYIKIDYVHGKMEPKEIRDKIRAFENGDT
DILVATTIIENGIDIENANTMIIDGVDKLGLSQIYQLRGRIGRGHKQGYCYLLIKEIQGK
KAKERAESLKNLEEEGGGGLQLSLEDMRIRGAGEILGERQHGALETFGYNLYMKMLQEEI
EKLKGDFVSQDTFEDIEIIVDYEAYIPDEYIEKNQKIRVYRELVEISDLAQLEGYKEELK
DIYGKMPKEALGLFEYIALKFRARKLGIKSAITLEDKSSQIKFDREKVDVDIVFTMLTAG
KIKYLNREELIIYNGEIKEFIDLYEEYGRRKNNERV
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatataggggacgtattccttttttgttgaaggatcataaagaaaaaattgta
tatctgtgttcatcgaatagaaatattgaagactataatgcagtattagatgatgtatat
gagggtaaagttcttagatttgaaagtactggaaatgaagaagaaatagaaaaattaaac
tatgattttttaaaacttgtaaaatcagatgaaaagtatatacttttagtctctttagaa
tcatttttaagagattactttttagaaggggaaaagttatcttttaagttgggacaaact
attgatgtgtcttctcttgaaaataaacttatagataaaaaatatgaaagaaactatatg
gttcaagagagaaaacagtttagtacaagaggagatattatagatatatttccagcagat
ggaaatttacctgttagaatggaactaagttttggagatgagatagaaagaatctctata
tttgatatagaaactcaaagaagtattgaaaaaaagcagtcttttgaaatgtatatggac
aataataatgaaaaattagtatctttttatgacattgtaaaaaagataaaaaatgtaaag
atatttattgaaaatccagagcttttaaaatataagttagaagagttagttttaagagat
agagataaagaatctatattgcgaagtagatttaatgaaataaaaaatcaaggtgaagag
atagaactaaaacaattttctcaccaagatataggaagatttagtgattatgaatatgta
aaagatatttcaaatgagagtttgaaaaagattttaataatgtcagatgaagctaaaaga
tatcaagagatatttaaagagtgtaaaaatatagagtttaaacgttatcctttgtatgaa
ggttatgaagaagaaaatcttttagttttaacagatagagaactaaaaggtgtaagagtt
agaagagaaacaaaagacaagataagtttacgatacaaaaatgtttctgaaataagagaa
ggggactatataatccatgaaaactatggagttggactctatcttggaattgaagtaata
gatggacacgaatatttaaagataaaatatgcagatgaagataaactttttgttcctgta
gagggaataagcagaatagaaaaatatatctctcacccaggtgtaactcctgaattatat
aatttggggagaagaggatttaaaaggaaaaaagaaaaactttatgaagagatgcttgta
tttgctaaagaaattattgaaattcaggcaaaacgtgaaagcggaaatgggtataaattt
acattagataccatctggcaggaagagtttgaggaaggttttccatacaatgaaacgcta
tctcaaaaacaggctatagaagatgtaaaaaaagatatggaatcttctaaggttatggat
agagtaatttgtggagatgttggatatggtaaaacagaagttgcaatgagagcagcattt
aaagctgcaacagacggtaaacaagtagctataatggtgcctactacaattttagctcaa
caacattacaatagattttgtgagagaatgaaaaattatcctataactatagaactttta
agtagacttaaaacacctgctgaattaaaaaaagcaatcaatgcaatagaacagggaagt
actgatatagttattggaactcacagacttttatcaaaagatgtaaaatttaaagattta
ggacttgtcatcattgatgaggagcaaaaatttggtgtaaaagctaaagaacaattaaaa
aaatatagagctaatgtagatatgctaacactgacagcaacgcctattcctagaacatta
aatttatctttgttaggaataagagatctatcggtaatagatacacctccagaaggaaga
aagcctgttgaaacactttttattccaactgaaaacaatgagataaaaaatataataatg
aaggaaatagcaagagaaggacaagttttctatatctataactttgtaaatggaataaaa
tataaggtgcaagagttagaaaaacttttacctgaatatataaaaatagattatgtccat
ggtaaaatggagccaaaagagataagagataaaattagagcttttgaaaatggagataca
gatattttagttgcaactactataatagaaaatggtattgatattgaaaatgcaaatact
atgattatagatggagtggataagttaggcctttctcaaatatatcagttgagaggaaga
ataggacgtggtcataaacagggatattgctatctattaatcaaagaaattcaaggcaaa
aaagcaaaagaaagagctgagtctttgaaaaatttagaagaagaaggtggaggtggactt
caactttctttagaagatatgcgtattagaggtgctggagaaatattaggagagcgtcaa
catggagctttagaaacatttggatacaatctgtatatgaagatgttacaagaagagatt
gaaaagttaaaaggggattttgttagccaagatacatttgaagatatagagataatagtt
gattatgaagcatatattccagatgaatatatagagaaaaatcaaaagatacgtgtgtat
agagagcttgtagaaatatctgatttagctcaactagaaggatataaagaggagttaaaa
gatatttatggaaagatgccaaaagaggctttaggactatttgaatatatagcacttaaa
tttagagctagaaaacttggaataaaaagtgcaataacacttgaagataaaagctctcag
ataaaatttgatagagagaaagtagatgttgatatagtctttactatgttgacagctgga
aagataaaatacttaaatagagaggaattaataatctataatggagaaataaaagagttt
atagatctctatgaagagtatggaaggagaaaaaataatgaaagagtttga
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