Flavobacterium indicum: KQS_09205
Help
Entry
KQS_09205 CDS
T01781
Symbol
uvrA2
Name
(GenBank) Excinuclease ABC, A subunit UvrA2
KO
K03701
excinuclease ABC subunit A
Organism
fin
Flavobacterium indicum
Pathway
fin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQS_09205 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_09205 (uvrA2)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQS_09205 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KQS_09205 (uvrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_22
nSTAND3
Viral_helicase1
AAA_18
AAA_23
T2SSE
AAA_25
cobW
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CCG53775
UniProt:
H8XUJ7
LinkDB
All DBs
Position
1957779..1960610
Genome browser
AA seq
943 aa
AA seq
DB search
MQHSEETIEIIGARAHNLKNIDVTIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTNKSPRSTVGTITEIYDFLRLLYARAA
DAFSYNTGEKMVSYSDDQIKELIYTEFDGKRINILAPVVRSRKGHYRELFEQIAKQGFLK
VRVDGEIRDLDYGMKVDRYKTHDIEIVIDRIAVKQDEDTDKRITEAIKVAMHHGDDILMV
IEHESNEVRFYSRSLMCPTSGISYPSPEPNNFSFNSPKGACPSCNGLGVVNEINLNKIIP
NPKTSIKNGGFAPLGEQKSTWIFKQLELIGEKFGFKLSDPIESIPAEAMDMILNGGNEKF
SVVSKVMGITKDYKIDFEGISNFIKNQYEQSDSQSIKRWAKEFMDENECSACGGSRLRKE
SLYFKLNDKSIGDLVQMDVVELAQWFHDLPNHISEKQQVIATEILKEINARISFLLDVGL
DYLNLNRSSKTLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNERLIKSLESLR
DIGNSVLVVEHDKDMIERADHVIDIGPKAGRFGGQIISQGTPKELLKENTITAQYISGKM
QIEIPTERRIGNGKSLKLTGATGNNLKNVSVEFPLGTMICVTGVSGSGKSTLINETLYPI
LNTHFYNAVKKPQPYKKIEGLEHIDKVIDIDQSPIGRTPRSNPATYTDVFSEIRSLFTQT
PEAMIRGYKPGRFSFNVSGGRCETCEGSGVRTIEMSFLPDVYVECETCQGKRFNRETLEI
RYKGKSISDVLNMTVDEAVDFFENIPKIYRKVKTIQDVGLGYITLGQQSTTLSGGEAQRI
KLATELSKKDTGNTFYILDEPTTGLHFEDIRILMDVINKLVEKGNTVVIIEHNLDVIKLA
DYIIDIGPEGGKGGGTVVCSGTPEEVIKNKKSHTALFLKKELS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattctgaagaaaccattgaaattattggcgctcgtgcccataacttaaaaaat
atagacgttaccattcctcgtgaaaagcttgtagtaattacaggattatcgggttcagga
aaatcatctttagcatttgacactatttatgcagaaggtcaacgtaggtatattgaaact
ttttcagcttatgcccgtcagtttttaggtggattagaacgtccggatgttgataaaatt
gatggtttatcacccgtaattgcaattgaacaaaaaacgaccaataagagcccgcgctct
actgtaggaactattaccgaaatttatgattttcttcgtctattatacgctagagctgca
gatgcatttagttataatacgggtgaaaaaatggtttcgtattccgacgaccaaatcaaa
gagttaatttacactgaatttgacggcaaaagaatcaacattcttgcgccagtagttcgc
tcaagaaaaggacactaccgtgaattatttgagcaaattgccaaacaaggttttctaaaa
gtccgagttgatggcgaaattcgcgatttagattacggaatgaaagtggatcgttacaaa
acccacgatattgagattgtaattgatcgtatagccgtaaaacaagacgaggacaccgat
aaaagaattaccgaagcaatcaaagtggccatgcatcatggtgacgatattttaatggta
atagagcatgaaagcaacgaggttcgtttttacagtcgaagcttaatgtgtccgacttca
ggaatctcttacccgagtccggaacctaataatttttcattcaattcaccaaaaggagct
tgtccaagttgtaacggacttggtgtagtgaatgaaatcaacctcaataaaatcatcccc
aatccaaaaacttcaataaaaaatggcggttttgctcccttaggcgaacaaaaaagcact
tggatttttaaacaattggaactgattggagaaaaattcggatttaaattatccgatcca
attgaaagtattcctgctgaagccatggacatgattttgaatggtggaaatgaaaaattt
tcggtagtttccaaagtaatgggaattaccaaagattataagattgattttgaaggtatt
tcgaattttataaaaaatcagtacgaacaatccgattcacaaagcattaaacgttgggca
aaagaattcatggatgaaaatgaatgttcggcttgtggaggttctcgattaagaaaagaa
tcgttgtattttaaattaaatgataaaagtataggcgatttggttcaaatggatgtggtt
gaattggcccaatggttccatgatttaccgaatcatatttctgaaaaacagcaagttata
gcaactgaaattctgaaagaaatcaacgctagaataagttttttattggatgttggatta
gactacttaaatttaaatagaagttcaaaaaccttgtccggtggtgaagcccaacgtatt
cgattagcgacacaaattggttcacaattagttggtgtattgtatattttagacgagcct
agtattggattacatcaacgagataacgaacgattaatcaaatcattagaaagtttacga
gatattggaaattcagttttagtagttgaacacgacaaagacatgattgaacgtgccgat
cacgtaattgatatcggtccgaaagcaggtcgttttggtggacaaatcatcagtcaggga
actccaaaagagttgttgaaagaaaacactattactgcgcaatacatcagcggtaaaatg
caaattgagattccgacagagagaagaatcggaaatggtaaatctttaaaactgacgggg
gcaaccggtaacaacttaaaaaatgtatcggtagaatttccattaggcaccatgatttgt
gttacaggtgtttcaggaagtggcaaatcaactttaattaatgaaaccctttatcccata
ttgaatacacatttctataatgcagtaaaaaaaccacagccttataagaaaatagaagga
ttggagcatattgataaagtaattgatatcgaccaaagtccgattggtagaacaccaaga
agtaaccctgcaacctatacggatgtattttcagaaattagaagtttatttactcaaacg
ccagaagccatgattcgtggttacaaaccgggacgatttagttttaatgtttctggtggc
cgatgtgaaacttgtgaaggaagtggcgttcgaactattgaaatgagttttttacccgat
gtatatgtagaatgtgaaacttgtcaaggcaaacgattcaatagagaaacattagaaata
cgatacaaaggaaaatcaatttcagatgttttaaacatgactgtagatgaagcggttgat
ttttttgaaaatattcccaaaatttaccgaaaagtaaaaactattcaagatgttggattg
ggttatattacactaggacaacaaagtactaccttatctggtggggaagcccaacgcatc
aaattagctactgaattatctaaaaaagatactggaaatacattttatattttagacgaa
cctacaacaggtttacattttgaagacattcgtatattaatggatgttatcaataaatta
gtagaaaaaggcaatactgtggtaatcattgagcataatttagatgtaataaaattagct
gattacattattgatattggtcctgaaggtggtaaaggcggcggaacagtggtttgctct
ggcacaccagaggaagtaataaaaaataaaaagagtcatactgcgttgtttttgaaaaaa
gagttatcataa
DBGET
integrated database retrieval system
