KEGG   Flavobacterium johnsoniae UW101: Fjoh_4396
Entry
Fjoh_4396         CDS       T00508                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
fjo  Flavobacterium johnsoniae UW101
Brite
KEGG Orthology (KO) [BR:fjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fjo02048]
    Fjoh_4396
Enzymes [BR:fjo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Fjoh_4396
Prokaryotic defense system [BR:fjo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Fjoh_4396
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 HSDR_N ResIII DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ABQ07403
UniProt: A5FBL4
LinkDB
Position
5301022..5304138
AA seq 1038 aa
MRKMSQYKTIAESNNFIVLDKYDKYSVLNEAPSSYQTEAALEKELIQDLINQGYENPDLN
SMEALLANVRVQLQALNNMAFSDSEWTRFVEEYLDKPSDNLVEKTRKIHENYIYDFVFDD
GHIQNIYLVDKKNIARNKVQVIKQFEQKGTHANRYDVTILINGLPLVQVELKKRGVAIRE
AFNQVHRYTKESLNSTNSLFKYLQVFVISNGTDSRYFANTVERNKNSFDFTMNWAKADNT
LIKDLKDFTTTFFEKRTLLNVLLTYSVFDTSDTLLIMRPYQIAATERMLWKIQSSFQAKN
WSKVESGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDFQTMKEYQRFSP
DSVNGSDSTAGLKRNLEKDDNKIIVTTIQKLNNLMKTESDLAIYQKQVVFIFDEAHRSQF
GEAQKNLNKKFKKFYQFGFTGTPIFAGINALGAESTQSVFGCELHSYVITDAIRDEKVLK
FKVDYNDVRPQFKSIETEIDEKKLTAAENKKAFLHPARIKEVSQYILKNFRIKTHRNQGT
NKGFNAMFAVSSVDAAKCYYEELNHLQKESEKPLRIATIFSYAANEEQSAIGEIVDENFE
PTALDSSAKEFLTAAINDYNTMFKTSFGVESKEFQNYYRDLAKRVKNKEIDLIIVVGMFL
TGFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIITFRDLETATVDAITLFG
DKNTKNVVLEKSYKEYLEGFTDIATGHARRGFIDVVKDLNEKFPNHNEIVTEKDKKEFSK
LFGEYLRVENILQNYDEFTNLKAFQGIDLNDGQAIQEFKENYFVSDNDIAIMQEISLLPE
RTIQDYRSTYNDIRDWLRREKSGKEAEESTIDWDDVVFEIDLLKSQEINLDYILELIFEH
NKKNKDKATLIEEIRRVIRASIGNRAKESLVVDFINETDLETIQDKANVIDSFFKYAQEK
QKKEASELITDENLNEEEAKRYITASLKREFANENGTELNAILPKMSPLNPQYLTKKQSV
FQKISFFVDKFKGVGGQL
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgaggaagatgtcacagtataaaaccatagcagaatcaaacaattttattgttttagat
aagtacgataaatattcagtgcttaatgaagcaccttcgagttatcaaacggaggctgca
cttgagaaagaacttatccaggacttaatcaatcaaggatatgaaaatccagatctaaac
agtatggaagcgctattggcaaatgtcagagtgcaattgcaggcactcaataacatggcc
ttttcagatagcgaatggactcgttttgtagaagaatacttagacaaaccaagtgataat
ctagttgaaaaaactagaaaaattcatgaaaattatatctacgattttgtttttgatgat
ggacatattcaaaatatttatttagttgacaaaaagaatatcgctcgtaataaagtacag
gtaattaaacaatttgaacaaaaaggaacacatgccaatcgttatgatgttacaatttta
atcaatggcttgcctttggtacaagtagaactaaaaaagcgtggtgtagctattcgtgaa
gcatttaaccaagtgcatcgctatacaaaagagagtcttaacagtactaattctcttttc
aaatacttgcaggtttttgttatctcgaacggaacggacagccgctattttgcaaacact
gttgagcgaaacaaaaacagctttgactttactatgaactgggcaaaagctgataataca
ttgattaaagaccttaaagattttactacaaccttttttgaaaaacgcacgttgttaaac
gtattgcttacctattccgtttttgacacaagtgatacattactaattatgcgaccttat
caaatcgcagctactgaaagaatgttatggaaaattcaaagttcctttcaagctaaaaat
tggtctaaagtagaaagcggtggttatatttggcatacgacagggtcgggtaaaacgctg
accagttttaaagcggctcgtttagctactgaattagatttcattgataaagtatttttt
gtagtggatcgcaaagatttggactttcaaactatgaaagaataccaacgcttttctccc
gatagtgtgaacggttcggatagtacagcaggcttaaagagaaatttggagaaagatgat
aataaaattattgtcacaactattcagaagctaaacaacttgatgaaaacagaaagtgat
ttagccatttatcaaaaacaagtagtttttatttttgatgaagcacaccgttctcagttt
ggagaagctcaaaagaacctgaataagaagtttaaaaaattctatcaatttggttttacc
ggcacgccgatatttgcaggaataaatgcacttggtgcagaaagtactcaaagtgtgttt
ggttgcgaattgcattcttatgtaattacagatgcgattagagatgaaaaagtactgaaa
ttcaaagtagattacaatgatgttcgtccacaatttaaaagtatagaaactgagattgat
gaaaaaaaattaactgctgcagaaaacaaaaaagcatttttacatcctgcccgtatcaaa
gaagtttcacaatacatccttaagaattttagaattaaaacgcataggaatcaaggtaca
aacaaaggttttaatgccatgtttgctgtaagtagtgtggatgcagccaaatgttattat
gaagaattaaaccacctgcaaaaagaaagtgaaaaaccattaagaatagcaacgatattc
tcttacgctgccaatgaagagcaaagtgccattggtgaaattgtcgatgaaaactttgag
ccaacggcattggacagcagtgccaaagaatttttaacggcagcaataaacgactacaac
acaatgtttaaaacaagttttggagtcgagagcaaagagttccaaaactattaccgtgat
cttgcaaaacgtgtaaaaaataaagaaattgaccttatcatcgtagttggtatgtttctt
actggctttgatgctccaacgcttaacactctgtttgtcgataagaacctgcgttatcat
ggtttaatgcaagctttttctcgtactaatcgtatttatgatgctacaaaaacctttgga
aacattattactttcagagatttagaaacagctactgtagatgctataaccttatttgga
gacaaaaacacaaaaaacgtagtacttgaaaagagctataaagaatatttagaaggtttt
acagacattgcaacaggacatgcacgtagaggtttcatagatgtggtaaaagacttaaat
gaaaaattccctaatcacaatgaaattgtaacggaaaaagataaaaaagaattctcaaaa
ttattcggagagtatttacgagtggaaaatatcttgcagaattacgatgagtttaccaat
ctcaaagcatttcaaggtattgatctaaatgatggtcaagccattcaggaattcaaagaa
aactactttgtgtcagacaatgatattgcaataatgcaagagataagtttgttaccggaa
cgaacaattcaagattatcgttctacttataatgacatacgcgattggttaagacgtgaa
aaaagcggaaaagaagctgaagaatccactatagattgggatgatgttgtcttcgaaata
gacctacttaaatctcaagaaattaacctggattatattcttgaattgatttttgaacat
aataaaaagaataaagacaaagccaccttgatagaagaaatccgccgggtgattcgtgca
agtataggcaacagagcaaaagaaagtttagtagtagattttataaatgaaacagacctt
gaaaccattcaagataaagcaaatgttatagattcattcttcaaatatgctcaggaaaaa
caaaaaaaggaggcttcagaattaattacagatgaaaacttaaatgaggaagaagcaaaa
cgatatattacagcatctttaaagcgtgaatttgccaatgaaaacggaactgaactcaat
gcaattttacctaaaatgagtcctttaaatcctcagtatttgacgaaaaagcaaagtgta
ttccagaaaattagcttctttgtcgacaaatttaaaggagttggagggcaattgtaa

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