Ferrigenium kumadai: FGKAn22_23590
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Entry
FGKAn22_23590 CDS
T07187
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fku
Ferrigenium kumadai
Pathway
fku00521
Streptomycin biosynthesis
fku00523
Polyketide sugar unit biosynthesis
fku00541
O-Antigen nucleotide sugar biosynthesis
fku01100
Metabolic pathways
fku01110
Biosynthesis of secondary metabolites
fku01250
Biosynthesis of nucleotide sugars
Module
fku_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FGKAn22_23590 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FGKAn22_23590 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FGKAn22_23590 (rmlC)
Enzymes [BR:
fku01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FGKAn22_23590 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BBJ00667
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Position
complement(2503603..2504145)
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AA seq
180 aa
AA seq
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MKILPTRLPGVLVLEPKVFGDSRGFFFESFNRRVFAEATGMELDFVQDNHSRSAKGVLRG
LHYQIKQPQGKLVRVVRGAVFDVAVDLRRSSPTFGQWAGTELSEDNQRQLWIPPGFAHGF
VVLSESADFLYKTTDYYAPEHERCVIWNDPDIGIDWPLRNPLLSGKDQAGRAFTEAEVFA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattgccgacaagattgccgggcgtcctggtgctcgaacccaaggtgttcggc
gacagccggggcttcttcttcgagagcttcaaccgccgcgtgtttgccgaggccacaggg
atggaactcgatttcgtgcaggacaaccattcacgctccgcgaaaggtgtactgcgcggc
ttgcattaccagatcaaacaaccgcagggcaagctggtgcgagtggtgcgcggcgcagtc
ttcgatgtggcggtcgatcttcgcagatcctcgccgacttttggccaatgggctggtacc
gaattgagcgaagacaaccagcgccagttgtggataccgcccggctttgcccacggattc
gtggtgctgtccgagagtgcggattttctatacaagaccaccgactattacgcgcccgag
catgaacgctgcgtcatctggaacgatccggatatcggcatcgactggccgctccggaat
cccctgctttcgggcaaggaccaggccgggcgggctttcaccgaagcggaggtgtttgca
tga
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