Filimonas lacunae: FLA_0565
Help
Entry
FLA_0565 CDS
T05172
Name
(GenBank) ATP-dependent DNA ligase LigC
Organism
fln
Filimonas lacunae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
CCDC23
Motif
Other DBs
NCBI-ProteinID:
BAV04573
UniProt:
A0A173MAJ1
LinkDB
All DBs
Position
complement(669586..671184)
Genome browser
AA seq
532 aa
AA seq
DB search
MKAFAELVHTLGTSTGTNEKLDALANYFVTADDKDKVWVIALFSGRRPKRIISSGFLQQW
CMELTDIPAWLFEESYHTVGDLAETIALLLPPPSLLSTEGSSLTNYLQQLVLLEKADEAA
KKEFITSCWRQMQREEIFVFNKLLTGGFRIGVSQKTMVNALAKKINLSASVIAHRISGNW
NPATTSFEHLLSEQATNIDFSKPYPFYLAHQLDKAPEELGTPQEWQAEWKWDGIRGQIIK
RNNELFVWSRGEELMTEKFPEYHILQTLLPDGIVMDGEIIPAVNGTPLPFALLQTRIGRK
NVTKKNLEETPIAFFAYDLLEYNYEDCREQPLETRRQHLEQIVNTIQHPSLLLSAVIPFD
SWPQLTEIRMEARQRVAEGLMLKRKSSAYQVGRKVGDWWKWKIDPLTIDAVMIYAQKGHG
RRSNLYTDYTFAVRDGDKLVSFTKAYSGLTDKEFAQVDAFVKNNAIEKFGPVRTVKPELV
FEIAFEGIAASNRHKSGVALRFPRISRWRTDKKPEEINTLDDLKKMLELYGK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatttgcagaactggtacatactttaggcacctctaccggcaccaacgaaaag
ctggatgcattggctaactattttgttaccgctgatgataaagataaagtttgggtgata
gccctgttcagtggcagacggcctaagcgtattatcagctcgggatttttgcagcagtgg
tgtatggagctaacagacataccggcctggttgtttgaagaaagctatcatacagtaggc
gatttagcagaaacaatcgccttgctgttacctccaccttctttgttatcaacagaaggc
agctcactcaccaattacctgcaacaactggtattactggaaaaagcggatgaagccgca
aagaaagaatttatcaccagctgctggcgtcaaatgcagcgggaagaaatattcgtgttc
aacaaattactaacaggcggctttagaataggcgtatcgcaaaagaccatggtgaacgcc
ctggctaaaaagatcaacctttctgcttctgttatcgcacaccgtatcagtggtaactgg
aaccctgccaccaccagttttgaacacctgttaagtgaacaggctactaatatagatttc
tctaagccctatcccttctatctcgcacaccagctggataaagccccggaagaactgggc
acgccacaggagtggcaggcggaatggaaatgggatggcattcgcggacaaattattaag
cgaaataatgaactgtttgtatggagtcgcggcgaggaattgatgacagagaaattcccg
gaataccatatactgcaaactttgctacccgatggcattgtaatggatggcgagatcatc
cctgctgtcaatggtacacccctaccctttgccttactacaaacacgcataggacgcaag
aatgtaacaaagaaaaatctggaagaaacccctatcgccttctttgcttacgacctgctg
gaatataattatgaagattgccgggagcaaccactggaaacgcgcaggcaacatctggaa
cagattgtaaacacaatccagcacccttctttattactatccgccgtaatcccttttgat
agctggccacagttaacagaaatacgcatggaagcccggcaacgcgtggcagaaggcctg
atgttaaaacgtaaatcttccgcctaccaggtaggccggaaagtgggcgactggtggaaa
tggaagattgatccgcttaccattgatgccgtaatgatatatgcacaaaaggggcacgga
cgccgtagtaacctgtataccgattatacttttgccgtaagagatggcgataagctggta
agctttaccaaagcctattcgggtttaacagataaagaatttgcacaggtagatgctttt
gtaaagaacaatgctattgaaaagttcggtcccgtgcgtacggtaaagcctgaactggtg
tttgaaattgcctttgaaggtatcgccgccagcaaccggcataagagcggcgtagcgctt
cgctttccgcgtatcagccggtggcgcactgataaaaagccggaggagattaataccttg
gatgatttgaaaaagatgctggaattgtatgggaagtaa
DBGET
integrated database retrieval system
