Filimonas lacunae: FLA_1545
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Entry
FLA_1545 CDS
T05172
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_1545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_1545
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_1545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_23
HTH_11
HTH_3
DUF2774
Motif
Other DBs
NCBI-ProteinID:
BAV05538
LinkDB
All DBs
Position
1888179..1888763
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AA seq
194 aa
AA seq
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MNKGALDITKHWLQQMAEGDEEAFAQLFDAYRRRIYTYIIKVTGSAELAEDAIQDIFLKI
WKDRTRLGHVENFNAYLHRMAHNYAYSGFRSMAREELIMAELKKETSPETAHPEQIFLSK
EVRAQILELVNQLSPQQRAVFLLSKEAGLKQEEIARKLDISVLTVKKHMGIAVRILREEI
RGRYGILIALLINF
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaggcgcgttggatattactaaacattggctacagcaaatggcggaaggcgac
gaagaagcttttgcgcagttgtttgatgcctacaggcgccgcatatatacctatattatt
aaagtaacaggatcggctgagctggccgaggatgctatacaggatatctttttaaaaata
tggaaagaccgcaccaggctgggccacgtagaaaattttaacgcctacctgcaccggatg
gcacataactacgcctattcgggttttcgcagcatggcccgggaagagctgattatggcc
gagctgaaaaaagaaacctcccccgaaactgcccatccggaacaaatatttttatctaaa
gaggtgagggcgcaaattctcgaactggtaaaccaactgagcccacagcagcgggctgtg
ttcctgttaagcaaggaagcaggcctgaaacaggaagaaattgcgcgtaagctggatatt
tcggtgcttaccgttaaaaagcatatgggcattgccgtgcgcatattgcgggaagaaatt
cgcggccgttatggcattttgatagcgctgctgataaatttttaa
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