Candidatus Fluviicola riflensis: CHH17_01395
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Entry
CHH17_01395 CDS
T05019
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00521
Streptomycin biosynthesis
flu00523
Polyketide sugar unit biosynthesis
flu00541
O-Antigen nucleotide sugar biosynthesis
flu01100
Metabolic pathways
flu01110
Biosynthesis of secondary metabolites
flu01250
Biosynthesis of nucleotide sugars
Module
flu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CHH17_01395 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CHH17_01395 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CHH17_01395 (rfbC)
Enzymes [BR:
flu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CHH17_01395 (rfbC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
MAAL_N
Motif
Other DBs
NCBI-ProteinID:
ASS47432
LinkDB
All DBs
Position
complement(346730..347275)
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AA seq
181 aa
AA seq
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MVIEQTHLEGVLLFSPRIFSDNRGHFFESFNHRDFESAVGFPVEFVQDNESVSHRNVLRG
LHFQLPPMSQGKLVRVVQGSVLDVAVDLRKNSSTFGKHVAVQLSSENKKQLWIPPGFAHG
FLSLEEGTIFSYKCTNYYAPETECTLQWNDPELGINWGIEKPVISAKDQNSLLFHTFTTP
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggtgattgaacaaacccatttagaaggtgttttactgtttagtccgcggatcttttcc
gacaatcgcggtcatttttttgaaagttttaatcaccgtgactttgaatcggccgttgga
ttcccggttgagtttgtacaggacaatgaatctgtttcgcaccggaatgtattgcgcggc
ctccattttcagttaccaccgatgtcacaaggcaaactggttcgggtcgtacaaggttca
gtactggatgtggctgttgatctgaggaaaaacagttccaccttcgggaaacatgttgcc
gtgcaattatcttccgaaaacaaaaaacagctgtggattccaccgggatttgcgcatggt
tttttaagcctcgaagaaggaacgatcttcagttataaatgcaccaattattacgctccg
gaaaccgaatgtacccttcagtggaacgatcccgaactggggataaactgggggatcgaa
aaaccggtcatttcggccaaagaccaaaattcgcttcttttccatacctttacaacaccc
ttttaa
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