Candidatus Fluviicola riflensis: CHH17_01615
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Entry
CHH17_01615 CDS
T05019
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00470
D-Amino acid metabolism
flu00550
Peptidoglycan biosynthesis
flu01100
Metabolic pathways
flu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CHH17_01615
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHH17_01615
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CHH17_01615
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flu01011
]
CHH17_01615
Enzymes [BR:
flu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CHH17_01615
Peptidoglycan biosynthesis and degradation proteins [BR:
flu01011
]
Precursor biosynthesis
Amino acid ligase
CHH17_01615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
RimK
GARS_A
TTL
Motif
Other DBs
NCBI-ProteinID:
ASS47473
LinkDB
All DBs
Position
complement(395053..396015)
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AA seq
320 aa
AA seq
DB search
MKTVGLFCGGFSSEFDISMKSAQTIVDNFPSTYTIVKIEVTKAAWFAHLPEGKVPFNMET
LSFSNAGTETKVDIGLIYIHGNPGENGKIQAYLDMKGLPYVNSGALASELSFDKWYCNQF
LSKFGVRIAESVFMTSRTAVDEATIIAQLGLPCFVKPSDSGSSYGISRVNTADALGPALD
KAFAEGGTVIVEAFLDGTEVTCGIYRRHSGLHALPLTEIASENDFFDYEAKYLGKSQEIT
PARIDNAVREQVWEVARKCYQLLQLKSIARIDFMIVNNVPYLIEVNTTPGFSAASIVPQM
LAADGISIHDFWKEIFEVEL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggtaggattattttgcggtggtttttcttcggaatttgatatttcgatgaag
agcgctcaaacgatagttgacaactttccttcaacgtatacaattgtgaaaatcgaggtg
acaaaagccgcctggtttgcccatttaccggaaggaaaagtgccgtttaatatggaaacg
ctgagtttttcaaacgcaggaacggagaccaaagtcgacatcggtttgatctacattcac
ggaaatccgggtgaaaatggaaaaattcaggcttaccttgatatgaaagggcttccgtat
gtaaactcgggagctttggcttcggaactttcattcgacaaatggtattgcaaccagttt
ctgagcaagtttggcgtgcggattgccgaatcggtgtttatgaccagcagaacggctgtt
gacgaagcaacgatcatcgctcaattgggattaccttgttttgtgaaaccgtccgattcg
ggatccagttacggtatttcacgtgtaaacacagccgatgccttggggcctgcactagat
aaagcatttgctgagggcggaacggtgattgtggaggcatttttagacggaacggaagtt
acttgtggaatttatcgccgtcattccggattacacgcgttgccgctgactgagattgct
tctgaaaacgattttttcgattacgaagccaaatacctggggaaatcgcaggaaataact
ccggcccgcatagataacgcggtacgcgagcaggtttgggaagtcgcgcgaaaatgctat
caattattgcagttaaaatcgattgcgcgcattgacttcatgatcgtaaacaatgtgccc
tatctgatcgaagtaaataccactccgggattttctgcggccagtatcgttccgcaaatg
ctggcggcagatggaatcagtattcacgatttttggaaagaaatatttgaggttgagctc
tga
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