Fulvivirga ligni: LVD16_09225
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Entry
LVD16_09225 CDS
T09288
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_09225
Transporters [BR:
flw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LVD16_09225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UII23406
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Position
2072476..2074260
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AA seq
594 aa
AA seq
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MKKIIYIAGVMMGLFLTSCEDGLEAPAKSTLDESTIFSNYDLAKGAVDGIKEPFGQTNSY
RGRFLPWYGMNTDIEWYNSSTSGNDNSDLVTYDAKPNNSNMNSANNAWAMMYSGIERANL
CINGLRTYGDAVPGTDMGYLLGEALTLRAIYYADLMKAWGDVVARFEPINTSTLYLPKSN
RDIIYKQLLDDLAEASELVPWPNESSLTGTVEQVNKAFVKGFRARLALVAGGYSQYPDGV
RLSTDPDLSRDKMYALALQECKDVIASGTTQLEGSFEELWRKYNRDEINAGGESLWEIPF
SSGRGRWLFTFAVRHRSVDQYTGQARGGQGGPTPFMFYEYDPSDLRQDVTCVPYEWGDAD
KDTKIAQQQLTGIDSWAFGKFRYEWKDSYVTSSNDDGTNFMYMRYAEVVLMAAEAANELE
GPGSAAPYLRMLRERAFDPADWSTMVDGYINGLGSKEEMFQAIVKEHKLEFCGEMLRKQA
LIRWNLLGDKLEEAKAKMYDLRNTTGEYSDVPQTVYYEIGEDGESLVTYGIERGETDNRS
ADFAYSMDWATPDEIEDEKIETLYTFDPDQHQFWPIWQVFLDASNGQLKNDYGY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattatatatatagcgggagtaatgatgggactgttcttaacatcttgtgaa
gatggtcttgaagctccagcaaaatcaactttagatgaatctaccattttttccaactat
gatttggctaaaggagcggtagatggcatcaaagaacctttcgggcaaactaattcttac
cgagggagatttttaccctggtatggaatgaacactgatatagagtggtataactcttca
acaagtggtaatgataattctgacttggtaacttatgatgccaagcctaataactctaac
atgaactcggctaataatgcctgggccatgatgtattcaggtattgaaagggctaatctt
tgtatcaacggtttaagaacttacggtgatgctgtgcctggaaccgatatgggatattta
ttgggagaagcattaacattaagagccatttactatgcagacctaatgaaagcatgggga
gatgtggtggccagattcgaacctattaatacaagtacactctatttacctaaatctaat
agagatatcatctacaagcagctattagacgatttagcagaggcatcagaacttgtgcct
tggcctaatgaatcatcattaacaggtacagtagagcaggtgaacaaggcttttgttaaa
ggattcagagcacgtttggcgctagtggccggtgggtattctcagtaccctgatggagtg
cgcttgagcacagatcctgatttatcaagagataaaatgtatgctttggcattacaagaa
tgtaaagatgtaatcgctagtggtacaactcagcttgaaggctcttttgaagagttatgg
agaaaatataaccgagatgagataaacgctggtggagagtctctttgggagatacctttc
tcatcaggtagaggtagatggttatttacatttgctgtacgccatagaagtgttgatcaa
tacactggccaagccagaggtggtcagggtggtcctacacctttcatgttctacgaatat
gatccatcagatcttcgtcaggatgtaacttgtgtgccttatgagtggggcgatgctgat
aaagatactaaaattgctcagcaacagcttactggtatagactcttgggcttttggtaag
ttcagatatgagtggaaagatagctatgtgacctcaagtaatgatgatggtactaacttc
atgtatatgagatatgccgaggttgtgcttatggcagctgaagcagctaacgagctggaa
ggtcctggttctgcagctccatacttaagaatgctgagagaaagagcttttgatcctgct
gactggtcaactatggttgatggttatatcaacggattaggaagtaaagaggaaatgttc
caagctatagtgaaagagcataagcttgaattctgtggcgaaatgttgagaaagcaagcg
cttatccgttggaatcttttaggtgataaattagaagaagctaaagctaaaatgtatgat
ttgagaaacactactggcgaatattcagatgtacctcagaccgtatattatgagatagga
gaggatggcgaatcattagttacctatggtatagagcgtggagaaacagataacagatct
gcagattttgcttattctatggattgggctacgcctgatgaaatagaagatgagaagata
gaaacactctatacttttgatcctgatcagcatcagttctggccaatttggcaagtattt
ttagatgctagcaacggacagttgaaaaatgattacgggtattaa
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