Fulvivirga ligni: LVD16_09705
Help
Entry
LVD16_09705 CDS
T09288
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
flw
Fulvivirga ligni
Pathway
flw00540
Lipopolysaccharide biosynthesis
flw01100
Metabolic pathways
flw01250
Biosynthesis of nucleotide sugars
Module
flw_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LVD16_09705 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flw01005
]
LVD16_09705 (rfaD)
Enzymes [BR:
flw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LVD16_09705 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
flw01005
]
Core region
LVD16_09705 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
DapB_N
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
UII23502
LinkDB
All DBs
Position
complement(2189551..2190507)
Genome browser
AA seq
318 aa
AA seq
DB search
MIIVTGAAGFIGSQLIHKLNQENFNYIIAVDKFDNEKKNKNLEGLKIQQKVDRDDFMSWL
DVNHEEVEFFFHIGAKTDTTLFDVELLERLNTNYTKEVWKRCVKYQIPLVYASSAATYGL
GEYGYDDDESNIDKLKPLNPYGQSKQDFDVWALDQDEKPFFWAGLKFFNVYGPNENHKGR
MASVIWHAFNQISDTGGMRLFRSHNPEYKDGEQQRDFVYVKDVLDVCIWLMHHRKDSGIY
NLGSGKARTFLDLTKAVFKAMDKEENISFIDTPEDIRDKYQYFTEANMDKLKSIGYGKKF
YELEDGVEDYVKGYLLLK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacgggtgctgcaggattcataggaagccaacttatacacaaactcaac
caagagaatttcaactatataatagctgtagataagtttgataatgagaagaagaacaag
aaccttgagggcctgaagattcagcaaaaagtagatagagacgacttcatgagctggctt
gatgtaaatcacgaagaggttgaattcttctttcacattggagcaaaaacagacaccaca
ttattcgatgtagagttattggagagattaaataccaattacaccaaagaggtgtggaaa
agatgtgtaaaatatcagattcctttagtttacgcttcttctgcagccacctatggtctc
ggcgaatatggctacgatgacgatgaatctaacattgataaattaaaacctttaaaccct
tacggtcaatctaagcaagattttgatgtatgggcgctggatcaggacgaaaaaccattc
ttttgggctggcttaaaattcttcaatgtttatgggcccaatgagaaccataaaggacgt
atggcttccgtaatctggcatgctttcaatcaaataagtgacaccggaggtatgagatta
tttaggtctcacaatcctgaatataaagatggcgaacagcaaagagactttgtatatgtg
aaagatgtgttagatgtatgcatttggctcatgcaccacagaaaagactcgggcatttac
aatctcggaagtggtaaggccagaactttcctggatttaaccaaagccgtattcaaagcc
atggataaggaagaaaatatcagtttcatagataccccagaggatattagagataaatat
caatatttcaccgaagccaacatggataaacttaaatctattggctatggcaaaaagttt
tatgagctagaagatggggttgaggattatgtgaaggggtatttgttacttaaataa
DBGET
integrated database retrieval system
