Fulvivirga ligni: LVD16_17775
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Entry
LVD16_17775 CDS
T09288
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
flw
Fulvivirga ligni
Pathway
flw01501
beta-Lactam resistance
flw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LVD16_17775
01503 Cationic antimicrobial peptide (CAMP) resistance
LVD16_17775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_17775
01504 Antimicrobial resistance genes [BR:
flw01504
]
LVD16_17775
Transporters [BR:
flw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LVD16_17775
Antimicrobial resistance genes [BR:
flw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LVD16_17775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
Motif
Other DBs
NCBI-ProteinID:
UII19693
LinkDB
All DBs
Position
4221928..4224981
Genome browser
AA seq
1017 aa
AA seq
DB search
MSLATISVDRPVLAIVMSITIIIFGVVGFNFLGVREYPSVDPPIITVSTSYAGANSDVIE
TQITEPLEESINGIEGIKTLSSTSNEGRSTIRVEFGLDTDLEAAANDVRDKVSRAIRNLP
PDADPPIVSKADADSSPILALRIFSKQRNLLEMSEIAENTFKENFQTIEGVSEVRVWGEK
RYSIRLWMDPDKLAAYKVTPLDVYNAVEAQNLELPSGRIEGNSTELTVRTLGRLNTPDQY
DDLIIRDDEFGLIRFRDVGRAEFYPENDRTVLKNNGTPMVMTAIVPQPGTNNLSIAEAFY
KRLEDIKRNLPNDIEVSVSFDNTEYIQDSINEVQETIYMAFILVVLIIFIFLRDWRTTFI
PVVTVPISLIGVFFLMYLFDFSINVLTLLGIVLSIGLVVDDAIVVLENIYTKIEKGQEPH
EAGKEGTNEIFFAVIATTVALTAVFFPIIFLQGITGRLFREFGLVVAGSVIISSFVALTL
TPMLSSNMLKKREKQNWIYNKTEPFFNWLNEKYGNALDSFMSFKWLAFVIIILSAAGIYF
SLKFLPEELAPMEDRGTFRIMATGPEGATFDYMDFYVDQMIQLGEKEVPEAESIISITSP
GFGSGSVNSAFIIAKLKDAENRERSQSQIVDDLKPKIAKNTRARAFVSQPQTIGGRGGGL
PVQYVIQATTLDKLKAVLPQFREKAQASGIFDFVDLDLKFNKPELNVTIDRDKARDLGVS
VRNIAQTLQLTLSGQRFGYFVKDGKQYYIIGQVERDNRNDPLDLKSIYVESDEGELIQMD
NLVTLTEESTPPQLYRYNRFASATFSASLAPGYTLGAGIEEMNRIADEVLDGSYSTALAG
SSLEYQESASNLYFAFGFALVLIYLVLSAQFESFRDPLIIMFTVPLALAGALGSLWIYGQ
SLNIFSQIGIIMLIGLVTKNGILIVEFANQRKAHDMDMTEAIVGAAKARFRPILMTSLST
ILGILPIALALGAGSESRVSMGIAVIGGMVFATLLTLFVIPAIYTFISTKDKRLARS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagctaccattagtgtcgacaggcccgtactggccattgtgatgtctatcacc
atcatcatttttggtgtagtaggctttaacttcctgggagtaagagagtaccccagtgtt
gaccctccgattatcaccgtttctaccagctatgccggggccaactccgacgtaatagaa
acacagattacggagcccttagaagaatccattaacggtattgagggtatcaaaacatta
agttctacatctaacgaaggtagaagcaccattcgtgtagagtttggactagataccgac
ttggaggccgcggccaatgatgtgcgtgataaagtatctcgagccatcagaaacctaccg
ccagatgctgaccctccaatagtttcgaaagcagatgctgactcctctcctattctggca
ctcagaattttcagtaagcagcgtaacctgttggagatgtccgaaatagctgaaaacact
ttcaaggaaaacttccaaaccatagaaggtgtaagtgaagtgcgtgtttggggtgagaaa
agatattctataaggctttggatggatcccgataaactagccgcctacaaagtaacgcca
ctggatgtttacaatgcagtggaagcgcaaaacctggagctgccgtctggtagaattgaa
ggaaacagtactgagcttactgtaaggacattaggccgattaaacacacctgatcaatat
gatgacttgatcattcgtgatgacgaatttggattgatcagatttagagatgttggtcgt
gctgagttttatcctgaaaatgacagaacggtattaaagaacaatggtactcctatggta
atgacggccatagtacctcagccaggaacaaacaacctcagcattgcggaagccttctac
aaacggttggaagatattaagcgcaacttacccaatgacattgaggtatctgtgagcttt
gataatacggaatatatccaggactctattaatgaggtacaggaaaccatttatatggcc
tttatcctggtggtgttgatcatttttatattcttgcgcgactggagaaccacattcatc
cctgtggtgaccgtgccgatcagtcttataggtgtattcttcttaatgtaccttttcgac
ttctctattaacgtgctcacgctattaggaatagtactttctatcggtttggtagtagat
gatgctattgtggtattagaaaacatttacaccaaaatagaaaaaggccaggaaccacat
gaggcaggtaaagaaggtactaatgagattttctttgccgtaatcgcgacgacagtggcc
cttacagcggtattctttcctatcatattccttcagggaattaccggtcgtttattccgt
gagtttggtttggttgtagcaggttctgttatcatttccagctttgtggcccttacttta
actccgatgctttcttctaacatgctgaagaagagagaaaagcaaaactggatttataac
aaaaccgagcctttctttaattggctgaatgaaaaatatggcaatgcacttgacagcttc
atgagttttaaatggttggcattcgtgatcatcattctttctgcagcaggtatctacttc
agtttgaagttcttaccagaagagcttgctcctatggaagatagaggaactttcagaatt
atggccacaggcccggaaggtgccactttcgattacatggatttctatgttgatcaaatg
attcaactgggagaaaaggaagtacctgaggctgagtcaattatatcaatcacttcaccc
gggtttggttctggatcagtaaacagtgcatttatcattgccaagctgaaggatgctgaa
aacagagaaagaagccaatcgcaaatagtggatgaccttaaaccaaagattgctaagaac
accagagctcgagctttcgtatcacaacctcaaaccattggtggtcgtggtggtggtctt
cctgtgcaatatgtgattcaggccactaccttagataagttgaaagctgtactacctcaa
tttagagaaaaagcacaggcaagtggtatctttgattttgtagaccttgatttgaaattc
aataaaccagaactcaacgttaccatcgatagagataaggccagagatttgggagtttcg
gtaagaaatattgctcaaacgctgcagctcacgctcagtgggcaacgttttggctacttt
gtaaaggatggtaagcagtattacatcatcgggcaggtagaaagagacaatagaaatgat
cctttagacttaaaatcaatctatgtagaaagtgatgaaggagaacttattcaaatggat
aatctcgttacacttaccgaggaaagtactccacctcagctttatagatacaaccgtttt
gcatcagctactttctctgccagtctagctccaggctacacattgggtgctggcatagaa
gagatgaacagaatagctgatgaagtcttagacggttcttacagtactgctctggctggt
agctctctagaatatcaggaaagtgccagtaacttgtattttgcctttggcttcgcattg
gtactcatctacttagtgctttcagcccagtttgagagcttcagagatccattgattatc
atgttcacagtgcctttagctctggcaggagcacttggttcattatggatatatggtcaa
tcattgaacatttttagccaaattggtattatcatgctcattggtctggttacgaaaaat
ggtattcttatcgtagagtttgccaaccaaagaaaggctcatgatatggacatgaccgag
gccatagtgggagctgctaaggcgcgtttccgccctattcttatgacgagcttatctacc
atattaggtattctgcctatagccttagcattgggtgctggctcagaaagtagagtttca
atgggtatagcggtaattggaggaatggttttcgccacgctcctaacgctttttgttata
ccagccatttatacgtttatcagcactaaagacaaaagattagcgaggtcatga
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