Fomitiporia mediterranea: FOMMEDRAFT_109545
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Entry
FOMMEDRAFT_109545 CDS
T03132
Name
(RefSeq) cysteine proteinase
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
FOMMEDRAFT_109545
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fme01002
]
FOMMEDRAFT_109545
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_109545
Enzymes [BR:
fme01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
FOMMEDRAFT_109545
Peptidases and inhibitors [BR:
fme01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
FOMMEDRAFT_109545
Ubiquitin system [BR:
fme04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
FOMMEDRAFT_109545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
UCH_1
MATH
Motif
Other DBs
NCBI-GeneID:
18670436
NCBI-ProteinID:
XP_007267694
JGI:
Fomme1_109545
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MSDPMDALDEKLNGTPVMEIDEAVSVRDRDAFAAKNMPDLGHEVKDFAVYTWRLTNWRKL
EKKLTSPEFECGGHRWRILLFPFGNSNAPPNDTVSVYLDYADPKRAPEGWHACAQFALVI
SNPNDPTIYTVSHAHHRFIAEECDWGFTRFSELRKLFTVQEGHNRPTIEDESADVSVFVR
VLEDPTGVLWHNFVNYDSKKETGYVGLKNQGATCYMNSLLQSLYCTRYFRRAVYQIPTED
DHPTESVALALQRVFYHLQTSDQPVGTTELTKSFGWKSLDSFLQHDVQEFNRVLQDKLES
KMKGTKADGAISRLFVGKMKSYVRCVNVDYESSRTEDFNDISLNVKGMKNLHESFRDYVA
VETLDGDNKYQAEGYGLQDAKKGIIFQSFPPVLHIQLKRFEYDIQRDAMVKINDRHEFPF
EIDLAEFLDENADRSQSWVYKLHGVLVHSGDLHGGHYFALIKPDRETRWLKFDDDRVTPV
TDREVLEENYGGEPLNGLTSPAQRQQVRAMKRFTNAYMLVYIRDVAIDEILAPFTDADTP
AHLKKRLDEERLQIEAKRREREEQHLFLTAKIITDETFQQHEGFDLASFDDKNWPPSDLP
AFRILKQETYHTFKGRVAQHFNYPESAFRLWVLVNRQNKTVRPDTHIPENEQSLTMEVIR
NNMAARQTDLRLYLDVVTEPEVAPGSIMIFLKHFDTSRQTLYGVGKCYVQRNAKVSDLHG
VINEKMRWPAGTPLKLYEEIKPGMIELMKAKMTFAQSEIQDGDVICFQVDISEKETHDLE
SQGLYANPLHFYDFLQNRVMIVFRPKFEEPDDINPEFDLVLSKKMNYDHMAAKVAERLNQ
DPIKLRFTTTMPSTNQPKSIIKRSLNQCISDIMSPNNYSHPSSTLILYERLEVSIIELET
KRSLKIVWTGIHNKEEAAYPFLLPKTSNIHDLSEQLAKKVTLAPGGTGKIRVFEMTRDGK
AQKEFTGAEMIGNIPEQVELFAEEIPREELEADEADKIINVFHFSKEVSRTHGVPFKFVV
KQGEKFSETKKRLQARINVSDKEVSKYRFALVQAATFKQPSYIEDEDMIYDHKFAPDDCL
GLDHLDKSGRTRQGAGEKAIVIKG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccaatggatgctctggacgagaagctgaatgggacgccagtaatggagatt
gatgaagctgtgtctgttcgagatcgagatgcgtttgcggcgaagaacatgcccgatctt
gggcatgaagtaaaggattttgccgtttacacatggcgattgaccaattggcggaaattg
gagaagaaactgacaagtccagagtttgaatgtggagggcatcgctggcgaatattgttg
tttccctttggaaactcaaacgcgccaccgaacgacaccgtatcggtataccttgattat
gcggacccgaagagggcaccagaaggctggcacgcctgcgcacaattcgcacttgtcatc
tcaaaccccaacgatcctaccatctacactgtttctcatgcccaccatcgcttcatcgcc
gaggagtgtgactggggctttacacgtttcagtgagctaaggaagttgttcacggtacag
gaaggccacaaccgtccaacgattgaagacgagtcagcggacgtcagcgtatttgtgcgt
gttttggaggacccaaccggcgttttatggcacaattttgtgaactatgactcaaagaag
gagaccggttatgttggcctaaaaaatcagggtgcaacatgttacatgaactccttacta
caatcactttactgcacacgatacttccgacgggctgtgtaccaaataccgacagaagat
gatcatccgactgagagcgttgccttagctctgcaacgcgtgttctaccatctacaaact
tctgatcagccagttggcacaactgagttgacgaaatcgttcggctggaaatcccttgac
tcgttcttacaacatgacgtccaggagttcaaccgcgtgttacaggacaagctcgaaagt
aaaatgaagggtacgaaagccgatggtgctatcagtaggctctttgtaggcaaaatgaag
agctacgtacgttgtgtaaacgtcgactacgagtcatcgcgcacggaagattttaatgat
atttctcttaatgtaaaagggatgaaaaatctacacgagtccttccgggactatgtcgct
gtagagacactggacggggacaacaagtaccaggcagagggatacggactgcaggacgcg
aagaaaggaatcatcttccaatctttccctccggttctacacattcagctcaagcgattc
gaatatgatattcagagggatgccatggtgaagattaatgatcgccacgaattccccttt
gagatagaccttgccgagttccttgacgaaaacgctgatcggagtcagtcatgggtgtac
aagctacatggtgtgctcgtacattcgggtgatctgcacggcggacattattttgctctc
atcaagcctgaccgcgagacacgctggttgaaattcgacgatgatcgtgtaacaccagtg
acagatcgtgaagtgctcgaagagaactatggtggtgaaccattgaatggtcttacgtcc
ccggctcagcgccaacaagtgcgagcgatgaagcgtttcacgaatgcgtacatgttggtg
tacatccgagatgttgcgattgatgagatcctagcacccttcacagatgccgatactcct
gctcatctcaaaaagcggcttgatgaggagaggctgcagatagaggccaaacgccgagaa
agggaagagcagcatctcttcttaaccgcaaagatcatcacggatgaaacattccaacaa
cacgaaggcttcgacttggcgtcgtttgacgacaagaactggcctccttcagatcttccc
gccttccgtatcctgaaacaggagacatatcacaccttcaagggtcgtgtggcgcagcac
tttaattacccggaatcagcattcaggttgtgggttttggtgaatcgacaaaataagacc
gtacgacctgacacgcatattccggagaacgagcaatcattgaccatggaggttatccgt
aataacatggctgctcggcaaactgatcttcgactctatctcgatgtggtcacagagccc
gaagtcgctcctggatcaatcatgattttcctcaagcactttgacacctcaaggcaaacc
ctttacggcgttggcaagtgctacgtgcaacgaaacgcaaaggttagcgatcttcatggt
gtcatcaatgagaagatgaggtggcctgcgggtacgccactcaagctctatgaggaaatc
aaaccgggcatgatcgagctcatgaaggcgaagatgacgttcgcacaaagtgagatccag
gatggcgacgttatctgcttccaagtcgatatcagcgagaaagagacgcatgatcttgag
agccaggggctctacgcaaatcctttgcacttttacgacttcttacagaatcgagttatg
attgtgttccgacccaagtttgaggaaccggatgatataaacccagagttcgatctcgtg
ctaagcaagaagatgaactacgaccacatggctgcaaaggtggctgaacgcctgaaccaa
gaccctataaaattgcgattcacgacaactatgccttcaactaatcagccaaaatccatc
atcaagcgttcccttaaccagtgtatttccgacattatgtcgccgaataattactcccac
ccatcctcaacactcatactctacgaacgactcgaagtgagcattatcgaactagagacc
aaacgtagtttgaagatcgtatggactggtattcacaataaggaagaggcggcgtacccc
ttccttctgccgaagacgtccaacattcacgatttatccgaacaactcgccaagaaggta
actttagcaccaggagggactggcaagattcgggttttcgagatgacgagggacggaaag
gcacaaaaggagttcactggagcggagatgattggaaatatacctgaacaggttgaacta
tttgcggaagagataccacgcgaggagctcgaggcggatgaggcagacaagatcatcaat
gtcttccacttctcgaaggaggtatctcgaacgcatggtgtaccgttcaagttcgttgtc
aagcagggcgagaagttctcagagacgaagaaacgcttgcaagcacgcatcaacgtgtca
gacaaggaagtatcgaagtatcgatttgctctggtacaggcagccacgttcaagcaacca
tcatacatcgaagatgaggacatgatctacgaccacaaatttgcacccgacgattgcctc
ggtctcgaccatctagacaagtcagggcggacacgtcaaggcgcaggcgagaaagcgatc
gtcatcaaagggtaa
DBGET
integrated database retrieval system
