Fomitiporia mediterranea: FOMMEDRAFT_113228
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Entry
FOMMEDRAFT_113228 CDS
T03132
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FOMMEDRAFT_113228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fme02000
]
FOMMEDRAFT_113228
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_113228
04090 CD molecules [BR:
fme04090
]
FOMMEDRAFT_113228
Enzymes [BR:
fme01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
FOMMEDRAFT_113228
Transporters [BR:
fme02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
FOMMEDRAFT_113228
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FOMMEDRAFT_113228
CD molecules [BR:
fme04090
]
Proteins
FOMMEDRAFT_113228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
RsgA_GTPase
AAA_15
AAA_23
nSTAND1
Motif
Other DBs
NCBI-GeneID:
18670709
NCBI-ProteinID:
XP_007270580
JGI:
Fomme1_113228
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MASSQPDTAVAAASEAPSILNNEKSDLTPDVLTDGQTTASARRSWFSGRKQDENSKRRKK
QVDVEDGDSSEKTAVDSATKQVDFTGLFRFSTRFELLLDFVGIICSATAGAAQPVMGIIF
GNLTQSFVDFGSAVQGLQDGTASPDEVEQAASNLRHEASLDASYLVYIGLGTLVCTFIHM
YTWVYTGEAASKRIREKYLSAVLRQDIAFFDNVGAGEISTRIQTDTHLIQQGISEKVALA
VHFLAVFIAGFIIAYVRSWQLALALTSILPFISITGAIMNKFVSKFMQTSLKHVAEGGSV
AEEAISTIRTAHAFGTQHILSALYDMHIEQAHVVDLKSAVVSGCGLSVFFFVIYSSYALA
FSFGTTLIIHGHATVGEIVNVITAILVGSGSLAMLAPEIQAVSQARGAAAKLWATIDRVP
SIDIENEGGLKPEIVIGKIDFQNVDFNYPSRPTVQIVKNLNMSFASGKTTALVGASGSGK
STIVHLVERFYDPLNGSVRLDGVDLRDLNLKWLRSQIGLVSQEPVLFATTIKDNVAHGLI
GTKWEHASEEEKFKLIKEACIKANADGFVSKLPLGYETMVGERGFLLSGGQKQRIAIARA
IISDPRILLLDEATSALDTESEGIVQDALDKAAAGRTTITIAHRLSTIKNADQIFVMDQG
VVLERGTHDELLANPDGHYARLVQAQRLREAEQRAGDEESAVTVLEGGANDKESRRDYAA
EAQEEIPLGRKASGRSLASELAEKGQKEKTTEEKDLDLLYIFKRFGAIQSNVWKSYAIGG
VFAILTGLAYPAYGIVYALAITTFQNTDDHHALRHNGDRNALWFFLIAILSTIFIGFQNY
GFGAAAANLTNRLKMMLFKAMLRQDIAFFDEDKHNTGALTTSLSGNPQKVNGLAGLTLGT
IVQSLATVVAGFIIGLIYQWKLALVGIACTPILISGGYIRLQVVVLKDQQNKKAHEQSAQ
VACEAAGAIRTVASLTREKNCLEIYSKSLEEPLRRSKRTAIWSNLIYAAAQGSAFFIIAL
VFWYGAQGVSKLEYSTNAFFVCLFAITFGSMQAGGVFAFVPDISSAKGAGSNIIRMMDSM
PEIDAESKEGAVLKEAQGHIRFENVHFRYPTRPGVRVLRDLNLDIKPGTYVALVGASGCG
KSTTIQLVERFYDPLSGKVYLDGQDISKLNVEEYRKHLALVSQEPTLYAGTVRFNVLLGA
TKPHEEVTQEEIEAACHDANILDFISSLPQGFDTNVGGKGSQLSGGQKQRIAIARALLRN
PKVLLLDEATSALDSNSEKVVQEALDKAAKGRTTIAIAHRLSTIQNADCIYFIKDGRVSE
AGTHEELIARKGDYYEYVQLQGLSK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcccaaccagatacagcggtcgcggccgcgtcggaagcgcctagtatactg
aacaacgagaagtccgacctcacacccgatgttttgacggacgggcagactacagcatcc
gcaaggcgcagctggttctcaggacgaaagcaggacgagaattctaagcgacgcaagaag
caggtggacgtagaggatggtgacagttctgagaagacagcggtggacagtgccacaaag
caggtcgacttcacgggattattcaggttctcgacgaggttcgaacttctcctggacttc
gttggtatcatatgttctgccactgctggagctgcgcagcccgtaatgggtataatcttt
ggtaatcttacacaaagcttcgtcgacttcggttcggcagtccagggcttacaagatgga
acggccagtcctgacgaggtcgaacaggcagcgtcaaatttacggcacgaagcttcgctc
gatgcctcgtatctcgtttatatcggccttggaacattggtctgcactttcattcatatg
tacacatgggtctacactggagaggccgcctccaagcgtattcgcgagaagtatctgagc
gcagtattgcgccaggacattgctttcttcgataacgtaggagcaggagaaatctctact
cgcattcagacagacactcacctaattcagcaaggcatttcagagaaagttgcgctcgct
gtccacttcttagccgtgtttattgctggcttcatcatcgcatatgtccgatcatggcaa
ctcgctcttgcgctaacatcgattttgccgttcatcagtattaccggtgctatcatgaac
aaatttgtttccaagttcatgcagacctccctcaagcacgtcgcagaaggaggctccgta
gcggaggaggccatttcgacgatccggactgcgcacgccttcggtacccagcatattctc
tcggcattgtacgatatgcacattgaacaagctcatgttgtggacctgaagtcagcggtc
gttagcggatgtggactctcagtattcttctttgttatttactcgtcgtatgcgcttgca
ttctcattcggcacaacgttgattatccacggacatgctactgtcggcgaaatcgtgaac
gtcatcaccgcaatactggttggctcgggctcgttggccatgttagcccctgaaattcaa
gctgtttcgcaagctcgaggagctgcagctaagctatgggcgaccattgaccgtgtgccc
tctattgacatcgagaatgaaggcggactgaaaccagagattgttataggaaaaattgac
ttccagaacgtcgacttcaattacccttcacgtccaaccgtgcagattgtcaagaacctt
aatatgtcatttgcttctggcaagacgacggcgcttgttggtgcatccggctccgggaag
tccaccatcgttcatcttgtcgagcgcttttacgacccactgaacggctctgttcgcctt
gacggtgttgatctacgtgatctcaatctcaagtggctacgttcacagattggactcgtt
tcacaagagcctgtactcttcgctacgacgataaaggataacgttgctcatgggctgatc
ggcacaaaatgggagcacgcttccgaagaggagaaattcaagctgatcaaagaagcgtgc
ataaaggctaatgctgacggatttgtttccaagctaccgcttggttatgaaactatggtc
ggtgaacgtgggttcttgctaagcggcggtcaaaagcagcgtattgccatcgctcgtgca
atcatctcggatccacgaattcttctcttggatgaagcaacatctgccctggatactgaa
agcgagggcattgtgcaggatgcgctcgacaaggcagctgctggtcgtacgacaatcaca
attgcgcaccgcctgtccacgatcaagaacgcagatcagatctttgttatggatcaggga
gttgtccttgagcgtggtacacacgacgagctgcttgcgaacccggatggacattatgca
cgtctcgttcaagctcagaggttacgtgaggcggagcaacgagcaggagacgaagagtcc
gccgttactgtattagaaggtggtgcaaatgacaaagaatcacgtcgtgactacgcggcg
gaagcgcaggaggaaattccactcggacgcaaggcatctggccgttctctggcgagtgaa
ttggctgaaaagggacagaaggagaagacgacagaagaaaaggacctcgacctgctctat
atcttcaagcgttttggtgcaatccagtctaatgtttggaagagctacgcgattggcggt
gtctttgctatactaactggtcttgcgtatcctgcctatggcatcgtttacgcacttgcc
attaccacattccagaatacggatgatcatcatgcccttcgacacaacggcgatcgcaat
gcattgtggttcttccttattgcgatcttatcaacgatattcatcggattccagaattac
ggatttggagcagcggcagcgaacttgacaaacaggttaaaaatgatgcttttcaaagca
atgcttcggcaagatattgcattctttgacgaggacaagcacaacactggagctctgaca
accagcctcagtggtaacccacagaaggtcaatgggctcgcaggactcactcttggaact
attgtccagagtttggcgactgtcgtcgcaggtttcatcataggtcttatataccagtgg
aagcttgctcttgttggcattgcttgcactccaattctgatctcaggtggatatatccgc
ctccaagttgtcgtcctgaaggatcaacagaacaagaaagcacacgagcaatccgctcaa
gtcgcttgtgaggctgctggggcgattcgtacagtcgcatcactgactcgtgaaaagaac
tgtctcgaaatctatagcaagtctcttgaggagccgcttcgccgttccaaacgcaccgcg
atatggtccaacctcatttacgcggcggcacaaggctccgccttcttcatcattgcactt
gtattctggtatggcgcacagggagtgagcaaacttgaatacagcacgaacgccttcttt
gtttgtttatttgccatcacattcggttcaatgcaagcagggggtgtgttcgcgttcgtc
ccggacatttcgtcggcaaagggcgcaggctccaacatcattcgtatgatggattccatg
ccagagatcgatgctgagtccaaggagggtgctgtattgaaagaggcacaagggcacatt
cgttttgaaaacgtgcacttccgttatccaacacgtcctggtgtacgagtacttcgggat
ttgaacttggacattaaacctggcacgtatgtggcacttgtcggagcttcgggttgtggt
aagagtaccactatccagcttgtcgagcgcttctatgatccattgtcaggtaaagtctac
ctcgacggacaagacatctcaaagctcaatgtcgaggaatacaggaagcatctcgccctt
gtttctcaagaacctactctttatgcgggaacggtccgtttcaatgttttgcttggagcg
acaaagccacacgaagaagttactcaagaagagattgaagccgcttgccatgatgccaac
attctcgacttcattagttcattacctcagggtttcgacacgaatgtcggaggcaaaggc
tctcagctctctggcggtcagaaacaacgtatcgccatcgcacgagctcttctacgcaac
cctaaagtgctattgctggatgaggcgacgtctgcattagactcgaattctgagaaggtt
gtgcaggaggcgcttgacaaggccgctaagggtcgaacgactatagctattgcacaccgg
ctgtctaccatccaaaatgcagactgcatctacttcatcaaagacgggcgtgtcagtgaa
gctggaacgcacgaggaattgatcgcccgaaagggtgattactacgaatacgtccagcta
caaggcctatcaaagtag
DBGET
integrated database retrieval system
