Fomitiporia mediterranea: FOMMEDRAFT_128553
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Entry
FOMMEDRAFT_128553 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K15442
tRNA-specific adenosine deaminase 3
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_128553
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
tRNA modification factors
Deaminases
FOMMEDRAFT_128553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MafB19-deam
SET
dCMP_cyt_deam_1
TilS
Bd3614-deam
Motif
Other DBs
NCBI-GeneID:
18671526
NCBI-ProteinID:
XP_007270772
JGI:
Fomme1_128553
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MALALGLGSLFNHSDEPNVSFSVDSVNEKIRFTTARDIDLDEELCIFYGHNLWLTPVGSS
NEKFVISNGSATSYLDDWSALRGLVTVRNNPFSDGVPGELVQETDLPFLRTKVMPEDEGE
DEEGSIRTIKVWIVDVPDPKQTSLLLKWVKIAGLETPDLAHLKRIRRAGTISSLLLSSSE
QAPAIPESYDLPKPYQVDVPELVALTPKSLKLKAEIWPTVYAPRRKGEPEPWSQAKTAWA
WDAMQVLKDEARMAEKEGELPIISYVPQPFAEETDGAFKENMPFFLARDTRQSTLNPLRH
SVLNVIRKVADWRASFWPSPPRTSTPAVEVIAGKLTDSLTSSLTSMTDSVSENTGAETPR
LNGSNYLLTGLTLFTTHEPCMMCSMALLHSRVREVVFLHAMDATGGCGGADGRGTCVPRL
KGVNHRYNILRWKIADEEDGDIDWSVIRRLPAATDA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccctagctcttgggttgggatccctttttaatcattcggatgaaccaaacgtttct
ttctctgtcgattctgtgaacgagaaaatccgctttactacagcacgcgatattgatcta
gacgaagagctgtgcatattttacggacataatctttggttaacacctgtcggatcatcg
aatgaaaaattcgtcatctcgaatggttccgctacaagctatttagatgattggagtgca
ctccgaggacttgttacagttagaaataatccattctctgatggggttcctggcgaactt
gtacaggaaacggatctgccgttcttgcgaacgaaagtaatgcccgaagatgaaggcgaa
gacgaagaaggatccattcggacaataaaagtctggattgtcgacgttccagatccaaag
cagacgtcactcctgctcaagtgggtaaagattgctggccttgaaacacctgacttggcc
cacttgaaacggatccgacgagcaggcaccatctcttccttgctcctctcctcttccgaa
caagctcccgctatccctgagagctatgatctacccaaaccgtaccaggtcgatgtacca
gaattggtcgctctgacaccgaagtcgctcaagctcaaggctgagatctggcccacggtt
tatgcacctcgacgaaaaggagaaccggaaccgtggagccaggcgaaaacagcttgggca
tgggatgcaatgcaggtcttgaaagacgaggctcgaatggcggaaaaggaaggcgagctg
ccaattatctcatatgttcctcaaccatttgccgaagaaacagacggtgcattcaaagaa
aacatgcctttcttcttggcgcgtgacacccgccaatctaccttgaatccactccgacat
tctgtcctgaatgtcatacgaaaagttgcggactggcgcgcatcgttctggccatctcct
ccaaggacctcgacaccggcagtggaagtcattgcaggcaaattaaccgattcccttact
tcttccctgacgtctatgaccgacagcgtgtcggaaaatacgggtgcagaaacaccgcga
ctcaacggctcgaattacttgctcacaggtctcacgctgttcacgacccatgagccatgc
atgatgtgcagtatggcgctgttacattctcgagtgcgtgaggtcgtattcttgcatgcg
atggatgcgactggtggctgtggtggagctgatggtcgcggaacatgcgtcccgcgtctt
aagggggtgaatcaccggtataacatattacgttggaagattgcagacgaggaagatggc
gacattgattggtcggttatacgacggcttcccgcagcgactgatgcttaa
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