Fomitiporia mediterranea: FOMMEDRAFT_129311
Help
Entry
FOMMEDRAFT_129311 CDS
T03132
Name
(RefSeq) N-acetylhexosaminidase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00511
Other glycan degradation
fme00513
Various types of N-glycan biosynthesis
fme00520
Amino sugar and nucleotide sugar metabolism
fme00531
Glycosaminoglycan degradation
fme00600
Sphingolipid metabolism
fme00603
Glycosphingolipid biosynthesis - globo and isoglobo series
fme00604
Glycosphingolipid biosynthesis - ganglio series
fme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
FOMMEDRAFT_129311
09103 Lipid metabolism
00600 Sphingolipid metabolism
FOMMEDRAFT_129311
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
FOMMEDRAFT_129311
00531 Glycosaminoglycan degradation
FOMMEDRAFT_129311
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
FOMMEDRAFT_129311
00604 Glycosphingolipid biosynthesis - ganglio series
FOMMEDRAFT_129311
00511 Other glycan degradation
FOMMEDRAFT_129311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fme03110
]
FOMMEDRAFT_129311
Enzymes [BR:
fme01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
FOMMEDRAFT_129311
Chaperones and folding catalysts [BR:
fme03110
]
Intramolecular chaperones
Others
FOMMEDRAFT_129311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
18671562
NCBI-ProteinID:
XP_007271338
JGI:
Fomme1_129311
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MLKRLTCLSALAALVPLSVAALWPLPRNFTSGNAPLLLASNFSINASFEKPADFRDACDR
TMLYLHNDKLQPLNVDRGASLAGNMSSSPQLTSLQLYLTDASNVTTISEEVVKPPKERDE
SYSLNIPAEGGEAKLTANTTLGLFRGLTTFGQLWYTVDNTTFAIGAPWQITDSPAFPYRG
FMLDTARNYFPVDDINRLLDTMSWVKLNQFHWHIVDSQSFPLKLPNFPEIAKAGAYSNDS
IYTAGDVSKVVAFAASRGIDVLVEVDTPGHTSAISASHPEHVACAGKTPWATYANEPPAG
QLRIASDDTANFTASLLADVANLFPSSLFSTGGDEINANCYQNDEETQQSLSSSGKTIEQ
ALDGFTNVTHKAVRDAGKTPVVWEEMVLQHNVTLENDTVVMVWISSDDVKAVAEKGFQIV
HAASDYFYLDCGAGGWVGANPAGNSWCDPFKTWQKSYSFDPYGNLTSDQYPLVLGGESLL
WTEQSSPENMDSIIWPRAASAAEVFWTGDQLPGGVNRTSLQGVQSALPRLHDWSFRTRAR
GTKTISLQPLWCALRPGVCDLTA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagagacttacgtgcctttcggcacttgcggccctcgttccgctcagtgtagcc
gctctctggcccctcccgcgcaactttacctcgggcaacgctcctctccttcttgcgagc
aacttctctatcaatgcctcgtttgagaagccggccgactttagagatgcctgcgatcgt
acgatgctctatctgcacaacgacaagctccaaccgcttaacgttgaccgcggagcctcc
ctcgccggaaacatgtcatcctcaccacaacttacctcgcttcagctctaccttactgat
gcaagtaatgtgaccacgattagcgaggaggttgtgaaaccacctaaggaacgcgatgag
agttatagtttgaatattcctgctgaaggaggcgaggcgaagttgactgcgaacactacg
ctggggttatttagagggttgactacgtttggtcagctttggtatactgtggataatacg
acttttgctattggtgcgccttggcagattactgacagtccggctttcccgtatagaggg
ttcatgctcgatactgctcgtaactacttcccagtagatgatattaatcgcctgctcgat
accatgagctgggtcaaattgaaccagttccactggcatatcgtcgattcgcaatcattc
ccgctcaaactccccaacttcccagagatcgctaaagcaggcgcgtactcaaacgactcg
atctacacagcaggagatgtatccaaagtcgttgcgttcgctgcttcgcgcggtattgac
gttctcgtcgaggtcgatactcccggacatacctctgcgatatcggcttctcacccggaa
cacgtagcgtgtgcgggtaagactccctgggctacctacgctaacgagcctcctgcgggt
caattacgtatcgcttcagacgatactgcgaacttcactgcgagcttgttggcagatgta
gcgaatttgttcccgtcgagtttgtttagcacgggaggagatgagattaacgcgaactgt
tatcagaatgatgaggagacgcagcagagtttgagttcgagtgggaagactattgagcag
gcgcttgatgggtttacgaacgttacgcataaggctgttagggatgctgggaagacgcct
gttgtttgggaggagatggttttgcagcataacgtgacgcttgaaaatgacacagtcgtc
atggtctggatctcatcggacgacgtcaaagccgttgcagagaaaggcttccagatcgta
cacgctgcatcagattacttctaccttgactgtggtgcaggcggttgggtcggtgcgaac
cccgcaggaaactcctggtgcgaccccttcaaaacctggcaaaaatcctactccttcgac
ccatacggtaacctcacatcggaccaatatcctctcgtcctcggtggagagtctctcctc
tggaccgaacaatcctccccggagaacatggattcgatcatttggccacgtgcagcgtca
gctgcagaggtattctggaccggtgaccagctaccaggcggggtgaaccgcacgagtttg
caaggagtgcagagtgcgttgccgagattgcatgattggagttttagaacacgggcgaga
ggtacgaagacgattagtcttcaaccactttggtgtgcgcttaggcctggggtgtgcgat
ttgacggcgtaa
DBGET
integrated database retrieval system