Fomitiporia mediterranea: FOMMEDRAFT_149467 Help Entry FOMMEDRAFT_149467 CDS       T03132                                  Name (RefSeq) hypothetical protein   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism fme  Fomitiporia mediterranea Pathway fme03018   RNA degradation Brite KEGG Orthology (KO) [BR:fme00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FOMMEDRAFT_149467  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fme03019]     FOMMEDRAFT_149467 Messenger RNA biogenesis [BR:fme03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      FOMMEDRAFT_149467 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 PMC2NT HRDC T3SS_needle_reg AATF-Che1 Motif Other DBs NCBI-GeneID:  18673518 NCBI-ProteinID:  XP_007271851 JGI:  Fomme1_149467 LinkDB All DBs Position Unknown AA seq 845 aa AA seqDB search MSAEAGSSKAGKIWGSSFDSYNSELQSSVLQATKLAVGLPADVNFFRTVDNNFAQAIDSC SRKALALTNNLLELAEAHNSTSSRIKGKKKLGNQEDVVDGFGSLVVDVLDQLFERADTSL DDYMGHTKPAAISVKPPPAASTFTSSTRQGRLDPSLLHAAYLPKPQLKFRRRINSAQSSW SPNLRHKYNAQVPLGYVFHDTDVIEGDSCLGEGTSQSFHPYRYEIKHITYSRQMFEHRHP IRPSSFENTPFTWIDSKEQLDLLLDQLRHVQEIAVDLEHHSYRSFSGFLCLMQISTREED FIIDTLALREELEELNEIFTDPKIVKVLHGADSDVVWLQQDFNIYIVNLFDTYHASKLLD FPKHGLGALLEMYCDFVPDKRYQLADWRIRPLPDEMMKYARSDTHFLLYIYDNLRNALLD RARGQPDLVRSALSRSEDTALRIYEPEFYDLENGTGPGGWNTLSLKWGRALSGTQHTVFR AAHAWRDALARKEDESTRYVMPNHYLFQLAERPPTDMANLLSIFRPVPPLVRTQAASLLE VIRTAVKEVPSIAETRGECVKTQNRVVDDANSQIRSKHNTTVNSENASTSSAKTCVDIWT RKSGGLSASSSSLLGSTLARTASQVEDLSVTRSALFPKGWTPTKTAKRVLHGASIRYREA VSRIHSALVVAPIMPAALIAIPGSGNLKASVNVDINVASVPNQEQTRASAVPANEQQPHT LIAGVEASDTILTTGRTRERKGKRSRNPTTADEQDKANQVKKARVQMTSVNGDNEAIETK PDEFDYASAPNLLDEHIKDQPVLLKPQKGNTSKGRRAFEYGNFPAPPRAYNEVKGANMSH TFKGR NT seq 2538 nt NT seq  +upstreamnt  +downstreamnt atgtctgcggaagcagggagttcaaaggcagggaagatttggggctcaagttttgacagc tacaactctgaactacagagctctgtgcttcaagcaacgaagctcgccgtcggcttgcct gccgacgtaaacttctttcggactgtcgacaacaactttgctcaggcaatcgactcttgt tctaggaaggcactcgcactcacaaacaacttattggaactcgcagaagcacacaactcg acctcttcccgtataaaaggcaaaaagaagttagggaatcaggaggatgttgtggacggg tttggatctttggtggtggatgtgctagaccaacttttcgaacgggccgacacaagcttg gatgactacatgggtcatacaaagccggctgcaatatccgttaagccacctcccgcagcg tcgacctttacctcaagtacacgacagggtcgattggatccatcacttttgcatgctgcg tatcttccgaagcctcagcttaagttcaggaggagaatcaatagcgcacaatccagctgg tcgccaaatctgaggcataagtacaatgctcaagtgccgttgggctacgtgtttcacgac acagacgtcatagaaggggattcttgcctcggtgaagggacatcccaaagttttcacccc tatcgttatgaaatcaagcacatcacatattctcgacaaatgtttgagcatagacaccct attcggccatcctcgtttgagaacactccattcacatggatagactccaaagagcagcta gacctcctgctggatcaattgcgtcatgtccaggaaattgctgttgaccttgagcatcac agctaccgctcgttttctgggtttctttgcctcatgcaaatcagtacccgcgaagaagac ttcatcattgacacattagcgctcagagaagaactggaagaactgaatgagatcttcaca gatccaaagatcgtaaaggtcctccacggcgctgacagtgacgtcgtctggttacaacag gattttaatatctacattgtaaacctcttcgatacctaccatgcgtcaaagttactggac ttcccaaagcacggattaggcgcgttgctcgaaatgtattgcgactttgttcccgataaa cgataccagctagccgactggcgtatccggccgttgccagatgaaatgatgaaatatgca cgctcagatactcacttcttgctgtatatctatgataatttgcgtaatgcactcttggac cgtgcgcgaggacaaccggacttggttcgttcggcactaagtcgctcggaggataccgct ttgcgcatttatgaacccgaattttatgacttggaaaatgggactggacctggtggttgg aacacactttcgctgaaatggggccgtgctttgtctggcacacaacacactgtatttcgt gctgctcatgcatggcgtgatgcccttgcacgaaaagaggatgaaagtacgcgctatgtg atgccgaatcattatctattccaattggcggaaaggccgccgacggatatggctaatttg ttgtctatatttcgtcctgttccaccgctggttcgaacacaagcagccagcttgctcgaa gtcattcgcactgctgttaaagaggtgccatcgatagcagaaacgagaggcgaatgcgtg aaaactcagaaccgcgtagttgatgacgcaaattcgcaaatcaggagcaaacataacacc acagtgaacagcgaaaatgcctccacgagctccgcgaagacctgtgttgacatatggaca aggaagtcaggaggtctttccgcatcgtcctcgtccttgcttggttctactttagccagg acggcgtctcaagtcgaagatctgtcagttacgcgaagtgcactctttcctaagggctgg actccgaccaagactgcaaagagagttctacatggtgcttcgataagatatcgagaagct gtgtctcgcattcacagtgctctggttgtagcaccgatcatgccagctgccctaatcgct attccagggtcagggaacttgaaggcctctgttaatgtagacatcaacgtagcatctgtt ccaaatcaagaacagaccagagcctctgccgtacctgcaaacgagcaacagccccatacc cttattgctggggtcgaagcgtctgatacaattctaacaaccggacgtactcgagaaagg aaaggaaaacgttccaggaacccgaccaccgctgatgaacaagacaaagcgaatcaagtg aagaaagcacgagtccaaatgacgagtgtgaatggagacaatgaagcaattgagacaaaa cctgacgagtttgactatgcttccgcgccgaaccttctggatgagcatatcaaagatcag cctgtcttactgaaacctcaaaaaggaaacacatcaaaaggacgtcgcgcgttcgagtat ggaaatttcccagcacctccgcgagcgtacaatgaagtgaagggtgccaatatgtctcat acattcaagggacgataa

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