Fomitiporia mediterranea: FOMMEDRAFT_168881
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Entry
FOMMEDRAFT_168881 CDS
T03132
Name
(RefSeq) cysteine proteinase
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fme01002
]
FOMMEDRAFT_168881
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_168881
Enzymes [BR:
fme01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
FOMMEDRAFT_168881
Peptidases and inhibitors [BR:
fme01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
FOMMEDRAFT_168881
Ubiquitin system [BR:
fme04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
FOMMEDRAFT_168881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
DUSP
Rad60-SLD
Ubiquitin_2
UN_NPL4
GCR
Motif
Other DBs
NCBI-GeneID:
18676898
NCBI-ProteinID:
XP_007267836
JGI:
Fomme1_168881
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MREKRKRIASNAKGLSAGERLNRNRLLAEYDLRWNWIGTEAKHVSDITREHCLRAAGISL
SGLKRPCANKFIKDSRGCNPVQDLATSSEDPEDIIVISDGEEASTCDKKRCKDNPYCLNY
MGQEKWEDEDKAKDAYLKAHLKGEDPHEHLKEAQPVGLKNLGATCYANAFLQVWFQDIAF
RSGVYRCQPSPDNRIKFKDSPIFQLQVTFTALQEGIKSVFNPIKLVESLRLRTSEQQDAQ
EFSKLFMSHLDDEFKKQSDPDLRTLLSDQFEGKMVNATVCDKCKTRSERETTFLELEVNL
EKGGTLMDRIASLLAPERLDENNKYMCAICDSLQDATRYTEIRGLPPVLHISLLRFVYDF
ATFERKKSKLPLRFPPYLDMKPFLNSAGPGQMVGEETSGTEIYELRGVLLHKGPSAYHGH
YEAQVFNQETNQWYQFNDEAVTPLSSFYSPKSAPITSSEPIIVDGEDDTDRPAKRQKRNV
NSRRIDDSDEGEAASTAPVAISTGTKVLSSKDAYMLIYARREEPNLDDARVPVPPTDALE
IIRSSNEEHEKACADYNAMREQKKTEFIKVRDNIRDVYRSWHISSAYEPSVIVSKAALQK
WILSPLAPLESKSSVQSATPAPSEQKPVEEVSEAAQNTETVASSNPDIANDTPWEALNII
DNTNLLCTHSIDQERLLNPLADKDMKIISMEARDKIVKDGTRLLPELTVDNVCRLCVENE
FAEKLYQMEHPRLVAEFNEISSTATENEGFWISKTWFKDWVLNRPRMHVPSQPDPPPENV
SDDPALGFRSHVYCKHGSLTINVGTRRRISLEAVKLLQRIFQDWEPPPWDAETCPACDVD
VHISKESKLEQRKKAENEKAKFNRLNEENIFGQYGILQNSTFAVVPSEFIHSWRKWLVKP
GDSPRVTEINTQSMLCPHERLILDLSEEADFDEDVAVLTMSEWEQLQTLYEAGPLIKCEC
RMELDGSGHERRYIISEIPCCSDCRTKEKLSFNSTMLTVIRIDKGLVPSNSTQLPSIVVQ
HPLAPSPVSNGKKLNEAKNSITAKANGTRQSRRLQEGKYSNCQQIRIQKDWTVKDVKAAI
YKAFRIPTISQQLYYHGKELDDNSKTVAELQILNKDTLYLKEVIEDMIVLDSDIEDEPLR
KKSRKHDEGDAFKGTLLSGGTKSPPPPPNGSDNPPGSRPSSPLQKACSACTLLNPLDAER
CDACEAFL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaaacgcaagcgaattgcttcaaatgctaaaggcctctcggctggggaaagg
ctaaatcggaaccgtttactagcggaatatgacttgcgatggaactggattggcacggaa
gcaaaacacgtctcggatattactcgagagcattgtctacgagctgctgggatttctcta
tcgggtctcaaacgcccatgcgcgaataaattcatcaaggacagccgtgggtgtaatccg
gttcaagaccttgccaccagctcggaagatccagaggatatcattgtcatttctgatggc
gaggaggctagcacttgtgacaagaaacgatgcaaagacaatccatattgcttgaactac
atgggccaggagaaatgggaagatgaagataaagccaaagacgcgtatctcaaagcacac
cttaaaggggaagatcctcatgagcatctgaaggaagcacaaccagtcggactcaagaat
cttggtgctacatgttatgcaaatgcatttctacaagtctggtttcaagacattgccttc
cgctcaggcgtatacagatgtcagccgtccccagataataggatcaaattcaaggattcg
cctatctttcagcttcaagtgacattcacggctcttcaggaaggcattaaatccgttttc
aatccaataaagctcgtcgagagtctacggctacggacgtccgaacagcaagatgctcaa
gagttctcaaagttattcatgtcgcatcttgatgacgagttcaagaagcaaagcgatcct
gacctccgaacgttactgtcagatcagtttgaaggtaaaatggttaatgcgacggtctgt
gacaaatgcaagacgcggtctgaaagggagacaacatttcttgaacttgaagtaaatctg
gagaaaggcggtaccttaatggatcgaatcgcttcacttctagctcccgaaaggctggat
gaaaacaacaaatatatgtgcgcaatatgcgacagcttgcaagacgccactcgttataca
gaaatccgaggtctaccaccggttttgcacatctccctcctccgatttgtctacgacttt
gcaaccttcgagcgaaagaaatccaagcttcctctcagatttccgccatatctagacatg
aagccatttcttaattctgcgggtcctggccagatggtcggtgaggaaactagcggaacg
gaaatatatgagctgcgcggtgtgctcttacataagggacctagtgcctatcacggacat
tatgaagcgcaggtctttaaccaggaaactaaccagtggtaccaattcaacgatgaagcc
gtcacgcctttgtcttcgttctactctccaaagtccgcgccaattacgagcagcgaacct
ataatagtcgatggagaagatgacactgatagacctgccaaacgacagaaacgaaatgtt
aattcgcgtcggattgacgacagcgatgagggtgaggcagcgtcaacagcacctgttgcc
atatccacggggacaaaagttctcagttcgaaggatgcatacatgctgatttatgcgcga
cgcgaggaaccaaacctcgacgacgcacgcgtacctgttcctcccacagacgcactagaa
attatcaggtcgtcaaatgaagagcatgaaaaggcgtgtgctgactataatgcaatgcgt
gagcagaagaagacagaatttatcaaggtgcgggacaacataagggacgtgtatcggtcc
tggcatatatcctccgcttatgagcctagcgtaatagtcagcaaggctgctcttcagaaa
tggattttaagcccacttgctccactcgaatctaagagtagcgtgcaatcagctacgccc
gcgccctccgaacagaagccagtggaggaagttagcgaagctgcccaaaacactgagacg
gtcgcttcgagtaaccccgatatagcaaatgatactccatgggaagcgctgaacatcatt
gataataccaatcttctttgcacgcattctattgatcaagagcggctattaaatccgtta
gctgacaaagacatgaagatcatatcaatggaagcccgcgataagattgtcaaagatggc
acaaggctgttgcccgaattgacagtggataacgtttgtaggctttgtgttgagaacgag
tttgcagagaagctctatcaaatggaacatccccgtctcgtggcggagtttaatgaaatc
tccagcacagcaaccgagaatgaaggcttttggatatcaaagacatggtttaaagattgg
gtactaaacaggccgaggatgcatgtcccgtcgcagccggatcctccgcccgaaaacgtc
tccgatgacccggctttgggtttccgttcccatgtgtattgcaaacatggtagcttgaca
attaacgttggcactcgacgacgtatctcgttggaggctgtgaaactcctgcagcgaata
ttccaggactgggaaccacctccttgggatgcagaaacctgtccggcttgcgatgtcgac
gtgcacatatcaaaggagagtaaactagagcaacggaagaaagcagaaaatgaaaaggcc
aagtttaatcggttgaatgaagagaatatattcgggcaatatggaattctgcagaattca
accttcgcagttgtcccttcggagttcattcattcatggaggaaatggcttgtaaaaccg
ggagattcgcctcgagtgacggaaatcaacacgcaaagcatgctttgccctcatgagaga
ctgatccttgacctttctgaggaagccgactttgatgaagatgtcgccgtcttgacaatg
tccgagtgggaacagttacagactctatacgaggctggtccactaataaagtgtgaatgc
cgcatggaacttgatgggtccggtcatgaacggaggtacatcatcagcgagataccttgt
tgttcggattgtcgaacaaaggaaaaacttagtttcaattcaacgatgctaacagttatc
cgtattgacaaagggctggttcccagcaactcaacgcagttgccgtcgattgttgtccaa
cacccgttggctccatctcctgtttcaaacggaaagaagcttaacgaggctaaaaactca
atcacggcaaaagcgaatgggactcggcagtcaagacggttgcaagaaggcaagtattct
aattgtcagcaaatccggatccaaaaggactggaccgtgaaagatgtgaaagctgcgatc
tataaggctttcaggatcccgacaatatcgcaacaattatattaccacggcaaggagctc
gacgataactctaaaaccgtagccgagctccagatcctcaataaggacacgctttacctc
aaagaagtcatcgaggacatgattgttctggactctgacattgaggatgagcccctccga
aagaagtcgaggaagcatgatgagggtgatgccttcaaaggcacacttttaagcggaggc
acaaagtctccaccaccaccaccgaatggcagtgacaatcctccgggctcaaggccatcc
tctccactacaaaaagcttgctcggcgtgcaccttgctaaatccccttgatgccgagcgc
tgcgatgcttgtgaagcgttcctttga
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integrated database retrieval system
