Fomitiporia mediterranea: FOMMEDRAFT_19834
Help
Entry
FOMMEDRAFT_19834 CDS
T03132
Name
(RefSeq) vesicle transport v-snare protein vti1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
fme
Fomitiporia mediterranea
Pathway
fme04130
SNARE interactions in vesicular transport
fme04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
FOMMEDRAFT_19834
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
FOMMEDRAFT_19834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_19834
Membrane trafficking [BR:
fme04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
FOMMEDRAFT_19834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
SNARE
Prominin
CCDC22_CC
Fusion_gly
ZapD
HAUS-augmin3
Sec20
RIFIN
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
18677788
NCBI-ProteinID:
XP_007266218
JGI:
Fomme1_19834
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MDNSPTSLFDTYEADFDQIVASIRTKLDGDSPEQSGEQRKAALRRVEMELDEADEMVAQM
EIELQGMPQSIKQPYANRRNTAKSTLSSLKTRARTLHATVQRAALLSSTSDAAGSPFRDS
TDELPGGGISSDRTRLLKGTQLLEGGSQRLQDAHRVALETEDQGADILRDLRRQREQIEN
SRNTLQTADSAIDRASGTLKRMIRRMYQQRAVTAAIIIVLIVLIVVILWFKLS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggacaactccccaacctccctgttcgacacgtacgaagcagactttgatcagatcgta
gccagcatccgcacaaagctcgatggcgacagcccagaacaatcgggtgaacagcgcaag
gcggccttacgtcgtgtcgagatggagctcgacgaggcggatgaaatggtagcgcaaatg
gagatcgagctccaagggatgccccagagcattaaacaaccttacgcgaaccggcggaac
accgccaagtccacactctcctccctcaagacacgcgcacgcacgttgcatgctacagta
caacgcgctgcgctactttcgtctacctctgacgctgcaggctcgccgttccgggactct
acggatgaactgcctggtggagggatctcaagtgatcgaacacgcttgctgaaaggaacc
cagttactggagggtggaagtcagagattgcaagatgcacatcgtgttgcgttggagacg
gaagaccagggcgcggatatcctgagggatttgagaagacagagagagcagattgagaac
tctaggaataccttgcaaacagcagacagcgctattgaccgtgcgtctggaacactgaag
aggatgatccgacggatgtaccaacagcgtgcagtcacagcagcaattattatcgtcctc
attgtcctcatcgtcgtcatcctctggtttaagctctcttag
DBGET
integrated database retrieval system
