Fomitiporia mediterranea: FOMMEDRAFT_87635
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Entry
FOMMEDRAFT_87635 CDS
T03132
Name
(RefSeq) Piwi-domain-containing protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_87635
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_87635
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
FOMMEDRAFT_87635
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FOMMEDRAFT_87635
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
FOMMEDRAFT_87635
microRNA pathway
RISC loading complex
FOMMEDRAFT_87635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL1
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18680380
NCBI-ProteinID:
XP_007267410
JGI:
Fomme1_87635
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSYRGDRGGRGGRGGGDRGGFRGRGGGGDFRGGDRGRGRGGGGGRGGAREPGGFVLYHSL
SLLFHQPSAVDSRLAQQDQEALVSTFRNVSLTPTDLPLRPGWGTSGKAIKLRTNFFAVRV
PKGPLCEYDVKITPAVSVKRVKRRIFDLLEQVPEYQRYKGGVAHDFSAKLIAVRRLPQPI
SFTVPYTEEDGASRTGKKGEKKEYVVEMNFIQDIDLSVLTGFLSGDPSCRSLDIAPILSA
LNIVLAQHPSRNGVMVGRNRFFFPHENFNLGGGLEAWKGFYSSVRPAYKQLMVNVNVATT
AFYSEGNLANAMIEFRNATYGGRIDQFVRGVRVQTTHLGHKKSVKRASTLTARTYKFKWD
EAGGQQISVEEYFQKKYGLRLQHPDMPLIDVGGTKANLLPPEVCQILPGQPFRGKLADEH
TSQMILHACKPPNVNARAIVGPGLTSLGFKNDETPLPGFGIKISGQMAVVPARILSPPRV
MYAQKAQEIDIRASWNLRAVRFSRGSSLQNWAVLLIRDGNNRSEFQGINDPELRKTINGF
SKMCSTSGMSVRNDPRYTEAVMPPRSREDPTRKSAIAQIRNAITGLRPKVDLILVILSNG
DKHIYSGLKHLCDVYLDVHTVCVHAEKIRKDKGQLQYFANVALKVNMKLGGVNHGLDPES
MTWLRSEPTMLVGMDVTHPGPGSLKGTPSIAAVVASIDEHYAQFPASMRIQETRKEMITC
LKEMMIERIEGFREKSRNLLPNRILVYRDGVSEGQYSTVVKEEMPQIIDAFRKFDTAAKP
YRPKLTIVICGKRHHTRFYPTETSDADQLGNPRPGTVVDQGVTGVYAFDFFLQAHGGLQG
TTRPTHYFVVHDENNFSANALQQLTNDVSYMFARATKAVSLVSPAYYADLACERGRCYIH
ELLQAVESNTTSSGNEESVMRTATNLWRGGVQGPLLKNTMFYL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcgcggtgacagaggcggtcgcggcggccgaggaggcggtgatagaggtggc
ttccgtggccgaggaggaggcggcgattttagaggaggtgacagaggaaggggacgtgga
ggcggtggtggacgtggaggagcccgtgaacctggcgggttcgtgctttatcattcgctt
tcactgctttttcaccagccaagcgctgtcgactcgcgtcttgcacagcaggaccaggag
gctcttgtatccactttccgtaatgtctccctgacgccgacagacctgcccctccgtccc
ggctggggaacgagcggcaaggcaatcaaactccgcaccaatttcttcgccgtgcgcgtg
cccaaaggtccactgtgtgaatatgatgtcaagatcaccccagccgtctccgtaaagcgc
gtcaagcgcagaatcttcgatctccttgaacaggtgcctgaatatcagaggtacaagggt
ggcgtcgctcatgatttcagcgcgaagcttatcgccgtccggaggctgccccagccgata
tcattcacggtgccatataccgaagaagacggtgcttcacgcacgggaaaaaagggcgag
aagaaagaatatgtggtcgagatgaatttcatccaggatatcgatctatccgtgcttaca
gggttcctttctggagacccgtcatgccgctcactggacatcgcgcctatcctttccgca
ctaaatattgtccttgcccagcatccatcgcgtaacggtgtcatggttggccggaatcgc
ttcttcttcccccatgaaaactttaacctcggcggaggccttgaagcatggaaaggcttc
tactcctccgttcgtcccgcatacaagcaacttatggtgaacgtcaacgttgcgacgact
gctttctactcagaaggtaatctagcgaacgcgatgattgagttccgcaatgcgacgtac
ggcggcaggatcgaccagtttgtgcgcggtgtgagagttcagacgacccatttaggacat
aagaaatccgtgaagagggcgtcaacccttaccgcgcgtacctacaaattcaaatgggac
gaggcaggagggcaacaaatcagcgtcgaagaatatttccagaaaaaatatggcctccga
cttcaacatcccgacatgccgcttattgacgtcggcggcacgaaggcgaacctccttcca
cccgaagtctgccaaatccttcccggtcaacccttccggggaaaactcgcagatgagcat
acttcccagatgatcctccatgcatgcaagcctcccaatgtcaacgcgcgtgctattgtc
ggtccgggattgacctcactcgggttcaagaatgacgaaaccccgcttcctggattcggg
attaagatttcgggccagatggccgttgtgccagcacgcatcctctctccgccgagggtg
atgtatgcccagaaggctcaagaaatcgatatacgcgcgagctggaatttacgtgcagtc
aggttctcaaggggttcctcgttgcaaaactgggctgtcctgctcatccgcgacgggaac
aatcgctccgaattccagggtataaatgacccggagttgaggaagacgatcaacggattc
tccaagatgtgcagcacgagtggaatgagtgtgcgcaatgatccgaggtacaccgaggct
gtaatgcccccaaggtcgcgcgaggacccgactcgtaaatccgcgatcgcacagatccgt
aacgccattactggcctcagaccgaaagttgacctaatccttgtcatcctctccaatggg
gataagcacatatattccggactcaaacacctctgcgacgtctatcttgatgtgcataca
gtctgtgtacacgctgagaagatccggaaggacaaagggcaattgcagtatttcgcaaat
gtcgctctgaaggtgaacatgaagctgggaggggtgaatcatggattagaccctgagagc
atgacgtggctgaggagcgaaccgacaatgcttgtcggtatggatgttacccaccccgga
cctggtagtctgaagggaacgccgagtattgctgcagtcgtagccagcattgatgagcac
tatgcacagttccccgcgagtatgaggatccaagaaacgaggaaggagatgatcacttgc
ttgaaggagatgatgattgagcgcattgagggattccgcgagaagtctcggaacctcctt
ccgaatcgtattctcgtataccgcgatggtgtctccgagggtcaatattcaaccgttgtg
aaagaagaaatgccccagatcatcgatgccttccgaaaattcgacacagctgctaaacca
tatcgtccaaaactcaccatcgttatctgtggcaaacgtcaccacacgcgattctacccg
actgaaacctccgatgctgaccagctcggtaaccctcgccccggaacggtagtcgatcaa
ggcgttacaggtgtctacgccttcgacttcttcctccaagctcacggtggtctccagggc
actacaaggcctacacactactttgtcgtgcacgatgaaaataacttttcagcgaacgca
ctccagcaacttactaacgacgtgtcatacatgttcgctagggcgacgaaagcggtgtcg
cttgtcagtccagcgtactatgcggatttagcttgtgagaggggcaggtgctatatacat
gagctgttgcaggctgtagagagcaacacgacgagcagtgggaacgaggagagtgtgatg
aggactgcgacaaacctctggagaggaggtgtccaaggccctcttttgaagaatacaatg
ttctacctgtga
DBGET
integrated database retrieval system
