Francisella orientalis LADL 07-285A: M973_03370
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Entry
M973_03370 CDS
T02952
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fnl
Francisella orientalis LADL 07-285A
Pathway
fnl03410
Base excision repair
fnl03430
Mismatch repair
fnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M973_03370
03430 Mismatch repair
M973_03370
03440 Homologous recombination
M973_03370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnl03400
]
M973_03370
DNA repair and recombination proteins [BR:
fnl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M973_03370
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M973_03370
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M973_03370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AHB98154
LinkDB
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Position
complement(603422..605164)
Genome browser
AA seq
580 aa
AA seq
DB search
MLIKQKQINQKVLDTLLSKSYDLFSAPIISSRVSNFENIDLILRGSIKDLSSPFLFKDID
KAVDRLFQALQNNEVIGLETDHDCDGQTSHAILYEALTKIFNYPKDKIRSYIGHRMQEGY
GLSESLMNRILTDSIRPNLIITADNGSTDEPRIAVLKQNGIDTIVTDHHGIPPEGPPKSA
IAILNPTQHDCNYPDKAIAGCMVAWLFMAALRRKYLQNGKSLSKSYGLSNLLDFVAIGTV
ADCVNMANSHNNRIVTKLGIEQLKNNDRLCWDFLDKDKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDKRRIKETFENLTKQNSQRKEIQKKLTHEAITKAHQLDNNNNSLCILLN
DGHSGIHGITASRVKEMFGKPVIIFSETRNDPNIISGSARSVDSINIKTILDTIARKSPT
LMIKYGGHKGAAGLIINKSDFDTFYDLFESEIINFVKNNSISLEPILEYDFELEENDFKL
QTLEKIESLEPFGREFEKPLFCNSFTIENLRLVGKDKNHAQLVLRYKNIPSIKAIWFNAS
ENKIIERIAIGDTIKACYELQKEEFLGQINLSLNIKLIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaataaaacaaaaacagattaatcaaaaagttttagatactttattatcaaaaagt
tatgacttattttcggcaccgattatctcttctagagtaagtaattttgaaaatattgat
cttattctgagaggatctatcaaagatctatcatctccatttctattcaaagatatcgat
aaagctgtagatagactttttcaagcattacaaaataatgaagtcattggattagaaact
gatcatgactgtgatgggcaaacatctcatgcgattttatatgaggctctgacaaagata
tttaactatcctaaagataagattcgctcatatataggtcacagaatgcaggaaggatat
ggtctatcagagtctctaatgaatagaatattaacagatagtattagaccaaatcttatc
ataacagctgacaatggttcaacagatgagcctagaattgctgttcttaaacaaaatgga
atagacactattgtaactgatcaccatggtattccaccagaaggtcctccgaaaagtgct
atagctatacttaacccaacccaacatgattgtaattatcctgacaaagctatagctggc
tgtatggttgcttggctttttatggctgctcttcgtagaaaatatctgcaaaatggtaaa
tcattatctaagtcttacggattaagtaatttacttgattttgttgcaattggtacagtt
gcagactgtgttaacatggcaaatagtcacaataaccgcattgttacaaaacttggtata
gagcaactaaaaaataatgatcgtctatgttgggacttcttagataaagataaactatca
agtgagtatatcagtttcagtatagctcctttgctaaatagtgacggcagagtttctgat
gcactagggtctgttagctttttgcttgagaatgataaacgtagaattaaagaaaccttc
gaaaacctaactaaacaaaatagccaacgcaaagaaattcaaaaaaagcttactcatgaa
gcaataaccaaagcacatcaattagacaataataacaactcattatgtatactacttaat
gatggtcactctggaatacatggtattacagcaagtagagtcaaagaaatgtttggcaaa
cctgtgattattttttctgaaacacgaaatgatcctaacataatatcaggctctgctaga
agtgtggatagtattaatattaaaacaatacttgatactatagcacgtaaatcgcctact
ttgatgataaagtatggtggccataaaggtgctgctggcttaataattaacaaatctgat
ttcgatactttttatgatttatttgaaagtgaaattattaatttcgttaaaaacaatagt
atatctttagagcctattttagagtatgattttgagcttgaagagaatgatttcaaacta
caaaccctagaaaagatagaatctcttgaaccatttggcagagaatttgaaaaacctcta
ttttgcaatagcttcactatagaaaatctacgtttagttggtaaagataaaaatcatgct
caactagttttacgctataaaaatattccttcaatcaaagcaatatggtttaatgcttca
gaaaataagataattgaacgaatagctattggcgatactataaaagcctgttatgaacta
caaaaagaagagttcctcgggcagataaacttatctcttaatattaaacttatcgaaaaa
tga
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