Frankliniella occidentalis (western flower thrips): 113213544
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Entry
113213544 CDS
T07591
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
foc00535
]
113213544
Proteoglycans [BR:
foc00535
]
Cell surface proteoglycans
Others
113213544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Big_9
Motif
Other DBs
NCBI-GeneID:
113213544
NCBI-ProteinID:
XP_052121630
UniProt:
A0A9C6TWV5
LinkDB
All DBs
Position
Unknown
AA seq
2488 aa
AA seq
DB search
MPQRLALAVLLCSAALGLCLDTASFYGASYIKYPLQDAKNTTEISFQFRTKRADTMLLLA
AGKTDYCYIRLETGRLKVRINLGAGEAEVDSPRGLRLDDLVWHEVELTRKEADVTITIDH
IHVIKEKLPGRFFELNIHFGVYLGGMGDFTDLFLGHTEWLRGCLGDVKYNGNSLLQKSRQ
RTSSQKVEVQVITWNCAPEFDASVDSDLSFVEDGAYVSLPNPITRTGARWQLQLKTEANQ
GLLLYNSGQGARADYVGLELSGGRLRLLLDKGDGKAELSSEVRVDDGQWHTVVAHFNPTA
MEVTVDGQTVSARLDRGGNQYLDLHEVVYLGGTELSKRARALWQGLRDTSFRGCMRAVEV
DGRRLGLPDARVTHGVRAECLFDFVCAAQQPCVRGARCEQQGLSAFQCVCDQPLCVRPEF
ADSYKVYSRGPMPVDVELVELTTLSVAEGENVPVTTSHVNVVLDYVKYGVRDTGVLIRVL
QPPAHGKLIAEVWERGGGAPGLGAGSGTLFTLLDLAKDKVRYQHDGSESTRDQIVMELEL
QAGPDFVQPAHLQGPHRFALPVNITPVNDAPILSIPAGKTLRLAQGTRKVITPELLMADD
PDTLPAALVFTHVNADNKKGSGHGALEWTSSPGTVTTSFTQQDINEGKVSYAHRGERAEA
EASTARIALQVSDGIETSATAFLRVSAFPLQLRLVNNTGVVLTHRAAVTILPANLTFLTN
ADDPDLEVLYEVVRPPQYGNLQRARAADGSAAVVSAKGPGIDRFTSRQLAREQIRYVHAT
GQPAHDEFKFKVSVGEVRAPTTYDFRVTFTKLRLEQARRVDLKLNRSREALVTERHLLYR
TEPLATDAAKVVYHVVQVPRHGSLVLGLPGAPQQRQQQRLAPGDSFTQQDVKEGRLTYRL
HRTAYSRIRDEFTFRASAPDCEAIPGSLVVLHETAGGEVPGLAVTLERLQVAEGGASRLT
TAALRLAMTGVTSVRYAVTSGPSHGWLKVCSVKVSAPTLRLNATEFTSAELAAGQVEYSH
DDSESQHDAFHFVAMSSEAEDFMYAGTLHIDVVLKNDNAPVRAVDRVFRVVTGGERLLTG
RHLKYTDADLDASPEKITYRRRDIPNGGLYRASQPGVAVTEFTQKDLDDGRLLFRHHGAE
RGRVDLWVTDGQFVANGVLEVVASPPYVEVANNSRLLVRNGGAAQFSTSNLSADSNVNSL
PEHLRFEVLEGPGHGRLFLRDPGVGAGATAAAGAAGAGRPQQAAQQAVHFTQRDLEAGRL
WYQHDASDSFSDAFRFRVDVPGSTVEGRFEVRVFPSSYWEPFTVHANETITVEEATSVAV
TSRFLDVRQRHVPATDITFVVVEPPQFGYLEIESQAQATSTEDPRALLPQQPGQASVTVF
EQSLVNEGRVLYVQTAPNQTQDRVVVDVTNGISWMRGLVVRLAIIPDSLYLATGELRVSE
NSLVALPANILTVLTDYYRSRITEYVVVSPPAAGRMQHAREPGQAITKFSPQQLQAGLIQ
YQHDGSETQEDAFSVSAVAGDRSSTPARIRVVVAPVNDQPPKVVNSSSVHLWRGASAPIF
TTNLAVVDSDTSPHNVSFKVMSIRAGHIAFANTPAVPITKFTQADINSNNIIFVHSGVPE
SGRVELRASDGMKETEAISLEVQSEQPDFKVAANEVLHVFPMLRKCITAEHLMVVTTDPN
RNLTYSVRVPPTQGRLLLISERVGEAASSVSGGRGSSGREVLNFTQRDVNMSRLCYQHTS
PFKDLQANDSIEFDVTAPFIDTLTNQVFRIEVSVSSGGLDQFVSVSQLIVEEGGTAPLLL
NTSTVLDFLRRDVGIENPLIQVQVVLPPVHGALCVRTVCNATATTPFTSAQLGAGEVVYR
HDHSDTTWDEVALSLLLAPGDVLLGNVSIPVTVLPVNDQPFRLAEPSPHLAVVQGQAAPV
TRKQLLTEDADTRAEELVYDVISNPSQGRLVLDAAPPAAGAQTTAAPGAVVSVGRFSQAD
IDESRLWYVHDGPLQPDSFYFRVSDGKFAPVYTVFNIEVLPLTLNVSVRAALRLQQGSNV
AALSADNFLVSTNGRRDAVQYNVTRAPRHGAVFLSAARDRPAASFSQADVEAGRVLYMQT
DMTASSDAMELSAWVPSRPASVPALVLNVTVVPLVRLGLFSPIAGLKTRLDLSALDASQL
AKVTGSDPVYRVLRRPRFGKIRRIVRSSGSSSGEQQQRNGTAPTAAPGASPAVREREVER
FSHQELRAGLIYYVGKRTGQPGDEDSILFELAASIFQPASGELRFLLRSEFGPPPTAFVP
QRPRIPGPKGSYGVLGSDTVVVASPNMSNDYFLLVSMVAGVVVLALIVVVVIKCRAGSVQ
GLHDGQNGKSDITDRSLGPMPLPRPPDDLMPSSPRPKHFGVPSLSLASTPTSMPVPQCKV
IPLGPTGGIGVDSVTSSEPELNVNLRYPYGADDTPLPLPLPQEWGSTFDATAGLAPSPSD
ISFGTLPSQAQARASANNPLLRRNQYWV
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcgtctcgccctcgccgttctgctgtgctccgccgccctcgggctctgtctg
gatacagcgtccttctacggcgccagctacatcaagtacccgctccaggatgccaagaac
acgaccgagatctcgttccagttccggaccaagcgcgccgacacgatgctgctgctggcc
gccggcaagacggactactgctacatccggctggagaccggccgcctcaaggtgcggatc
aacctgggcgcgggcgaggcggaggtggactctccgcgtggcctgcgcctcgacgacctg
gtctggcacgaggtggagctgacgcgcaaggaggccgatgtgaccatcacgatcgaccac
atccacgttatcaaagagaagcttcccggacggtttttcgagctcaacattcactttggc
gtgtacctgggcggtatgggtgacttcaccgacctcttcctgggccacacggagtggctg
cgaggctgtctcggggacgtcaagtacaacggcaacagcctgctgcagaagtcccgccag
aggacgtcctcccagaaggtggaggtgcaagtcatcacgtggaactgcgcgccagagttc
gacgcgtcggtggacagcgacctgagcttcgtggaggacggcgcgtatgtgtcgctgccc
aaccccatcacccggacgggcgcgcgctggcagctgcagctcaagacggaggcgaaccag
ggcctgctgctgtacaactcgggccagggcgcgcgcgccgactacgtcgggctggagcta
tcgggcgggcggctgcgcctgctgctcgacaagggcgacggcaaggccgagctgtcctcc
gaggtgcgcgtggacgacggccagtggcatacggtcgtcgcgcacttcaaccccaccgcc
atggaggtgaccgtcgacgggcagaccgtgagcgcgcgcctggaccgcggcggcaaccag
tacctcgacctgcacgaggtggtgtacctgggcggcacggagctgagcaagcgcgcgcgc
gccctgtggcaggggctgcgcgacacgagcttccggggctgcatgcgcgccgtggaggtg
gacggccgccgcctggggctgccggacgcgcgcgtcacgcacggcgtgcgcgccgagtgc
ctgttcgacttcgtgtgcgccgcgcagcagccgtgcgtgcgcggcgcgcgctgcgagcag
cagggcctcagcgccttccagtgcgtctgcgaccagccgctgtgcgtgcggcccgagttc
gccgacagctacaaggtgtactcgcgcggcccgatgcccgtcgacgtggagctggtcgag
ctgacgacgctgtcggtcgccgagggcgagaacgtccccgtcaccacctcgcacgtgaac
gtggtcctggactacgttaagtacggcgtccgagacacgggcgtgctgatccgggtactg
cagccgcccgcgcacggcaagctcatcgccgaggtgtgggagcgcggcggcggcgccccc
ggcctcggcgccggctccggcacgctcttcaccctcctggacctggccaaggacaaggtg
cggtaccagcacgatggctccgagagcacgcgggaccagatcgtcatggagctcgagctg
caggctgggcctgacttcgtccagcccgcgcacctacagggccctcaccgcttcgccctc
cccgtcaacatcactcccgtcaatgacgcgcccatcctgagcatccctgcagggaagacg
ctgcgcctcgctcaggggacgcggaaggtcatcacccccgagctgctgatggcggacgac
ccggacacgctgcccgcggccctggtgttcacgcacgtgaacgcggacaacaagaagggc
agcgggcacggcgcgctcgagtggacgtcgagcccgggcaccgtcaccacgtccttcacc
cagcaggacatcaacgagggcaaggtgtcgtacgcgcaccgcggcgagcgcgcagaggcc
gaggccagcacggccaggatcgcgctgcaggtctcggacggcatcgagacgtcggcgacg
gccttcctccgggtctcggcgttcccgctgcagctgcgcctcgtcaacaacacgggcgtc
gtcctcacgcaccgcgccgccgtcaccatcctccccgccaacctcaccttcctcaccaac
gctgacgaccccgacctggaggtgctctacgaggtggtccgcccgccccagtacggcaac
ctgcagcgggcgcgcgctgcggacggctcggcggccgttgtgtccgccaagggtccgggc
atcgaccgcttcaccagccggcagttggcacgggagcagattcgctacgtgcacgccacg
gggcagcccgcgcacgacgagttcaagttcaaggtgtccgtcggcgaggtgcgcgcgccc
accacctacgacttccgggtcacattcaccaagctgcggctggagcaggcgcgccgcgtc
gacctcaagctgaacaggtcgcgcgaggcgctggtcacggaacgccacctgctgtacagg
acggagccgctcgccacggacgccgccaaggtcgtgtaccacgtggtgcaggtgccgcgg
cacggctccctggtgctggggctgcccggcgcgccgcagcagcgccagcagcagcgcctg
gcgccgggagactcgttcacgcagcaggacgtcaaggagggcaggctcacctaccggctg
caccgcacggcctactcgcgcatccgggacgagttcacgttccgcgcgagcgcgcccgat
tgcgaggccatcccgggcagcctggtggtgttgcacgagacggccggcggtgaggtgccc
gggctggccgtcaccctggagcggctgcaggtcgccgagggcggcgcctctaggctcacc
accgccgccctgcgcctcgccatgacgggcgtgacctcggtgcgctacgccgtcaccagc
ggaccctcgcacggctggctcaaggtgtgttctgtgaaggtctcggcgcccaccctgagg
ctcaacgcgaccgagttcacctccgcggagctggccgccggccaggtcgagtactcgcac
gacgactccgagtcgcagcacgacgccttccacttcgtggccatgtccagcgaggccgag
gacttcatgtacgccggcacgctccacatcgacgtggtccttaagaacgacaacgcgccg
gtgcgcgccgtggaccgtgtcttccgagtcgtcacgggtggcgagcgcctgctcaccggc
aggcaccttaagtacactgacgccgacctggacgcatccccggagaagataacgtaccgc
cggcgagacatccccaacggcgggctctaccgcgccagccagcccggggtggccgtcacg
gagttcacgcagaaggatctggacgacggccgcctgctgttccggcaccacggcgcggaa
cgcggccgggtcgacttgtgggtgacggacggccagtttgtggcgaacggcgtcctggag
gtggtggcgtcgccgccgtacgtggaggtggccaacaacagcaggcttttggttcgcaac
ggcggcgccgcccagttcagcacctccaacctgagcgccgactccaacgtcaactcgctg
ccggagcacctgcgcttcgaggtgctggagggcccagggcacggccgcctgttcctgcgc
gacccgggggtcggcgcgggggcgaccgcggccgcgggggcggcgggggcgggccggccg
cagcaggccgcgcagcaggcggtacacttcacgcagcgcgacctggaggcgggccgcctc
tggtaccagcacgacgccagtgactcgttctccgacgccttccggttccgggtggacgtg
ccgggctccaccgtggagggccgcttcgaggtgcgcgtcttcccgtccagctactgggag
ccgttcacggtgcacgccaacgagaccatcacggtggaggaggcgacgagcgtggccgtt
acgtcgcgcttcctggacgtccgccagcgccacgtgcccgccacggacatcaccttcgtc
gtcgtggagcccccgcagttcggctacctcgagatcgagtctcaggcgcaggccacgtcc
acggaggaccctcgcgccctgctgccccagcagcccggccaggcctccgtcacggtgttc
gagcagtccctggtcaacgaaggtcgcgtcctgtacgtgcagactgcccccaaccagacc
caggaccgcgtcgtcgtggacgtgaccaacggcatctcctggatgcgggggctcgtcgtg
cgcctcgccatcatcccggactcgctgtacctggcgaccggcgagctgcgcgtgtccgag
aactcgctcgttgcgctgcccgccaacatcctgaccgtgctcacggactactaccgcagc
cgcatcaccgagtacgtggtggtctcgccgccggccgccggccgcatgcagcacgcgcgc
gagcccggccaggccatcactaagttcagcccgcagcagctgcaggcggggctcatccag
tatcagcacgacggcagcgagactcaagaggacgccttctccgtgtcggccgtggcgggc
gaccgcagcagcacgccggccaggatacgggtggtcgtcgcccccgtcaacgaccagccc
cccaaggtcgtcaacagcagcagcgtacatctctggcgcggggccagcgcgcccatcttc
accaccaacctagccgtcgtggactcggacacttccccgcacaacgtgtccttcaaggtg
atgagcatacgcgccggccatatcgccttcgccaacacgcccgccgtgcccatcaccaag
ttcacccaggccgacatcaacagcaacaacataattttcgttcattccggcgtgcccgag
tcgggacgcgtcgagctgagggcgagcgacggcatgaaggagacggaggccatcagcctg
gaggtgcagtcggagcagccggacttcaaggtggcggccaacgaggtcctgcacgtgttc
ccgatgctgcggaagtgcatcaccgccgagcacctcatggtcgtcaccaccgaccccaac
aggaacctcacgtacagcgtcagggtgccgcccacgcagggcaggctgctgctcatctcg
gagcgcgtcggcgaggccgccagctccgtgtccggcgggcgcggctcctccggcagggag
gtgctcaacttcacgcagcgcgacgtcaacatgagccgcctgtgctaccagcacaccagc
cccttcaaggacctgcaggccaacgactcgatcgagttcgacgtgacggcgcccttcatc
gacacgctcacgaaccaggtgttccgcatcgaggtgtccgtgtcgagcggcgggctggac
cagttcgtgagcgtgtcgcagctcatcgtggaggagggcggcaccgcgccgctgctgctc
aacaccagcacggtgctggacttcctgcggcgggacgtcggcatcgagaacccgctgatc
caggtgcaggtggtgttgccgccggtgcacggggcgctgtgcgtgcgcacggtgtgcaac
gccacggccacgacgcccttcacgtcggcgcagctgggcgcgggcgaggtggtgtaccgg
cacgaccactcggacaccacctgggacgaggtggcgctgtcgctgctgctcgcgcccggc
gacgtgctcctgggcaacgtgtccatccccgtgacggtgctgcccgtcaacgaccagccc
ttccgcctggccgagcccagcccgcacctcgccgtcgtgcagggccaggcggcgcccgtc
acccggaagcagctgctcaccgaggacgcggacacgcgcgccgaggagctcgtgtacgac
gtgattagcaaccccagccagggccggctcgtgctggacgcggccccgccagccgccggc
gcgcagacaaccgcggccccgggcgccgtcgtctccgtcggccgcttctcgcaggctgac
atcgacgagagcaggctgtggtacgtgcacgacgggccgctccagcccgacagcttctac
ttccgggtctcggacggcaagttcgcaccggtctacacagtcttcaacatcgaggtgctg
cccctgacgctgaacgtgtcggtgcgcgccgcgctgcgcctgcagcagggttccaacgtg
gccgcgctgtccgccgacaacttcctcgtgtcgaccaacgggcggcgcgacgcggtgcag
tacaacgtgacgcgggcgccgcggcacggcgccgtgttcctgtcggccgcgagggaccgg
ccggcggcgtccttcagccaggccgacgtggaggcgggccgcgtgctgtacatgcagacg
gacatgacggcgtcctcggacgccatggagctgtccgcctgggtgcccagcaggccggcc
agcgtgcccgcgctcgtgctcaacgtgacggtcgtgccgctggtgcgcctcgggctgttc
agccccatcgccggcctcaagacccgcctggacctgtccgccctggacgcctcgcagctc
gccaaggtgacgggcagcgaccccgtgtaccgggtgctgcgccggccgcgcttcggcaag
atcaggaggatcgtgcgcagctccggctcctccagcggcgagcagcagcagcgcaacggc
acggcgcccacggccgcgcccggcgcctccccagccgtccgcgagcgcgaggtggagcgc
ttctcgcaccaggagctgcgcgccgggctcatctactacgtgggcaagcgcaccggccag
ccaggggacgaggactcgatcctgttcgagctggccgcgtccatcttccagcccgcctcg
ggcgagctgcgcttcctgctgcggtccgagttcgggccgccgcccacggccttcgtgccg
cagcggccgcgcatcccgggccccaagggctcgtacggcgtgctgggctcggacaccgtg
gtggtggccagccccaacatgagcaacgactacttcctgctcgtcagcatggtcgcgggc
gtcgtggtgctcgcgctcatcgtcgtcgtggtcatcaagtgccgcgccggatcagtccag
ggcctgcacgacgggcagaacggcaagtcggacatcacggaccggtcgctgggccccatg
ccgctgccacggccgcccgacgacctcatgccctcgtcgccgaggccgaagcacttcggg
gtgccgtccctgtcgctggcgtccacgcccacttccatgcccgtcccccagtgcaaggtc
atacccctgggcccaacgggcggcatcggcgtggactcggtgacgagctcggagcccgag
ctgaacgtgaacctccggtacccctacggcgccgacgacacgccgctgccgctgcccctg
ccccaggagtggggcagcacgttcgacgcgacggcgggcctcgcgccctcgccgtccgac
atctccttcggcacgctgcccagccaggcgcaggcgcgcgccagcgccaacaaccccctg
ctcaggaggaaccagtactgggtctga
DBGET
integrated database retrieval system
