KEGG   Frankliniella occidentalis (western flower thrips): 113216090
Entry
113216090         CDS       T07591                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
foc  Frankliniella occidentalis (western flower thrips)
Pathway
foc03030  DNA replication
foc03410  Base excision repair
foc03420  Nucleotide excision repair
foc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:foc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113216090
   03410 Base excision repair
    113216090
   03420 Nucleotide excision repair
    113216090
   03430 Mismatch repair
    113216090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:foc03032]
    113216090
   03400 DNA repair and recombination proteins [BR:foc03400]
    113216090
Enzymes [BR:foc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     113216090
    6.5.1.6  DNA ligase (ATP or NAD+)
     113216090
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     113216090
DNA replication proteins [BR:foc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    113216090
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     113216090
DNA repair and recombination proteins [BR:foc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     113216090
   NER (nucleotide excision repair)
    Other NER factors
     113216090
   MMR (mismatch excision repair)
    Other MMR factors
     113216090
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF3504
Other DBs
NCBI-GeneID: 113216090
NCBI-ProteinID: XP_026291591
UniProt: A0A6J1TL93
LinkDB
Position
Unknown
AA seq 955 aa
MSQKSITSFFSRQPLQKKENIIQPEDEKCSKGGSSAPVKSISDSEDSPIKGKKRSRKRAI
SDSDEDTSNESQKPEISVKEEDKSSETNITLPSTSDRKSGSPSRKVMKKMTAPVTKDPNI
DRTKLHPAIAKILKGGNDSDTTTDGKTSQPVVSTECEDSNSKDDFTLKMEVSDSEDGDSS
GKSNLTKQTTEEIDPKSKEKSHSPKTPKTADKKKSPKGSKETGSKTPKRVSKSSPKTPKP
SVHSFFTTVTTSDKKEVGSNDEDKPTDSSKDTTPSEKKVGTNQSTKTLLSCKSSGPESDF
NPASGPSYHPIDDACWKKGEKVPYMALAKTMEAIESITARLKIVEILANYFRSVIVLSPE
DLLPSVYLCLNKLAPAYEGLELGIADQFLMKAIAQTTGRTLAQIKTDAKDTGDLGIVAER
SKSNQRMMFQPTKLTVRAVYDKLKDIALMSGKESQSKKVDKVQAMFVACRQVEARFLIRS
LAGKLRIGLAEQSVLQALGQACTMTPPAQSYPPEIINACKGMSTESFKSAVNDQALILKT
TYCECPNYDKIIPVLLEGGIKSLPEHCHLTPGIPLQPMLAHPTKGVQEVLTRFDGLKFTC
EWKYDGERAQIHMDENGKVSIYSRNQENNTSKYPDIISRLATRKCLGDNVKSFVLDSEAV
AFDKEKQQILPFQILSTRKRKDANEDDIKVHVCVFMFDLLYFNGEPLVRKTLQERRKLLR
ENFKEVDEQFKFASSVDVTTMEEVQEYLEESVKGNCEGLMVKTLEEEATYEIAKRSRNWL
KLKKDYLEGCGDTLDVVVIGGYLGRGKRTGTYGGFLLACYDSENEEYQSICKIGTGFSDE
SLTEHTEFLKKHVIPKSRPYYRYDTSHEPDHWFDAVQVWEIKCADLSLSPAHRAAIGIVD
PEKGISLRFPRFLRIREDKSVENATSARQVADLYLNQDQIKNQASAKEVDEEDFY
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgtcacagaagtcaattacgtcgtttttctcgcgacaacctttgcagaaaaaggagaac
attatacaacctgaggatgagaagtgcagcaaaggtggcagtagtgctcccgtgaagagc
atctcagattctgaagattcgcctatcaaaggaaagaaacgaagtagaaagcgagcaata
agtgacagtgatgaagatactagtaatgaatctcagaagccagaaatatctgttaaggag
gaggataaatcgtctgaaacaaatattactttaccaagcacatctgatcggaaatcaggg
tcaccttccaggaaagttatgaaaaaaatgacagctcctgtaacaaaggacccgaatatt
gatcgtaccaaacttcatcctgctattgctaaaatattgaaaggtggtaatgattctgat
acaaccactgatggaaagacttcccagcctgtagtcagtacggaatgtgaagacagcaac
agtaaggatgattttactttgaaaatggaggtttctgattctgaagatggagattcttca
ggaaaatcaaatttaactaaacaaaccactgaagaaattgatccaaaaagcaaggagaaa
agccatagtcccaaaactccaaaaactgctgataaaaagaaatcccctaaaggttccaaa
gaaactggttctaaaacacccaaacgtgtttccaagtcttcaccaaaaactcctaaacca
tctgtccacagcttctttactacagtcactacttctgataagaaagaagtcggcagtaac
gatgaagacaaaccaactgactcttctaaggacaccactccctctgagaagaaagtaggc
accaatcaatctacaaaaactctgctctcttgtaaaagtagtggcccagaatctgatttc
aatccagcatcaggaccatcatatcatcccattgatgatgcctgctggaaaaaaggcgaa
aaagtaccctacatggcactagcaaagactatggaggccattgagagtatcactgctcgc
cttaaaatagttgaaattctagcaaactatttccgctctgtgatagttttgtctcctgaa
gatcttcttccatctgtgtacctttgcctcaataaacttgccccagcttatgaaggcctt
gaacttggaatagctgaccagtttttgatgaaggctatagcacaaaccactggtagaaca
cttgctcaaattaaaactgatgctaaagatactggcgaccttggaattgtagctgagcgt
agtaaaagcaatcaacgaatgatgtttcaacctacaaaattaactgttcgggctgtttat
gataaattgaaagatattgcgcttatgtctggcaaagagtctcaatcaaagaaagtggac
aaggtccaggctatgtttgtggcttgtcgtcaggttgaagcgaggtttctaattcgctcc
cttgcaggaaagttgcgtattgggcttgctgaacagtctgtcttacaggctttaggccag
gcttgcacaatgaccccgccagcacaaagctacccacctgagataataaatgcttgtaag
ggcatgagcacagaaagtttcaaatcggctgtaaacgaccaagctttgattctgaaaaca
acctattgtgaatgcccgaattatgataaaataattcctgttctgctggaaggtggaatt
aaaagtctaccagaacattgtcacttgactcctggaattccattgcaacccatgttggca
catccaaccaagggagtccaggaagtactcacaaggtttgatggattgaaattcacttgt
gagtggaagtatgatggagaaagagcacagattcatatggacgaaaatggaaaagtttca
atttacagtagaaatcaagaaaacaatacatccaagtaccctgatattatttcaagactg
gcaactaggaagtgcctcggagacaatgtgaaatcttttgtgcttgactctgaagctgta
gcatttgataaggaaaaacagcaaattcttcccttccaaattctcagcactagaaaaaga
aaggatgccaatgaagatgacattaaagttcatgtatgtgttttcatgtttgatttactc
tactttaatggagagccattggtgagaaagacactgcaggaacgaaggaaattactccgg
gaaaatttcaaagaagttgatgagcaattcaaatttgcttctagtgtagatgtcactacc
atggaagaagtccaagagtatcttgaggaatctgtgaaaggtaactgtgaaggtttaatg
gttaaaactctagaggaagaagcaacctatgaaattgcaaaacgatcaagaaattggcta
aagcttaaaaaggattatcttgaagggtgtggcgacactttagatgtcgttgtgattggg
ggctacttagggcgcggaaagcgtactggaacttatggaggtttccttcttgcctgctat
gactctgaaaatgaagaatatcaaagtatatgcaagattggaacaggatttagcgatgaa
tctctaacagaacacacagagttcttgaaaaaacatgtgattcctaaatctcgtccatac
tacagatatgataccagccatgagcctgaccattggtttgatgcagttcaagtttgggaa
atcaaatgtgctgatctctctctttctcctgctcacagagcagctattggaattgttgat
cccgaaaagggtatttctcttcgtttcccgcgtttcctacgaataagggaagacaagtct
gttgaaaacgccacctctgctagacaggtagcggatttgtatctcaatcaagatcagatc
aagaatcaggccagtgcaaaggaggtagatgaagaagacttttattaa

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