Frankliniella occidentalis (western flower thrips): 113218070
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Entry
113218070 CDS
T07591
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X3
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113218070
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
foc01002
]
113218070
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
foc04121
]
113218070
03400 DNA repair and recombination proteins [BR:
foc03400
]
113218070
Enzymes [BR:
foc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113218070
Peptidases and inhibitors [BR:
foc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113218070
Ubiquitin system [BR:
foc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113218070
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
113218070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
113218070
NCBI-ProteinID:
XP_026294039
UniProt:
A0A6J1TKM2
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MTIISDKTSASETNGPPPRKKICLSLSGKGKTKPSVTVAEADSPSEMSVTVNRGDLNKRR
VVRVRKDALEPGMMLNGFVPDSVNSIAASDDSPGSDVPPVATICNLGNTCFLNSILYTLR
FAPYFLHKLHHLVNDLADVAARNNAKVKSSSLGRSIGLSRKYYWDMEQMRASGENCAKKR
VQIVTEKLHEVYESLHSAELKESTEPFQPEIFLRALREVNPIFEGNQQHDAHELLGCLLN
YMRETCQELTKQLETHPNPAELCNGASSCEDVKKETKGSLLAHVGLSSSTSSIVSGGKWG
MRKSWKRKKPLGENILKTNRSTKNGSQTSVINNGNSAPHSSNGDSTSNIENAPNEPRILV
NGEVHDTTDVDNTNKENGSCTLRPLQEGDEGETTDDKTRLNFIEEDFEGVSVLCTRCLEC
ECVTERKEAFYEIGVPIASDQDPEKREDSDQISVLYRSSIVTEELLQSANKYWCEHCLRY
NEARRSVRYESLPPLLILHLKRFSSTFGSMVCMSKVNDYMPTPLVLDCFCVECLEATAQE
QGVKHRYQLYGVIMHLGATIASGHYVAYVRAADPIADYRSCDKEKRKTASLIATNTTKGP
SQPDGEKARGLLRFFSKSKSSNSDNVSTNHLTNSQYRNTCRSLDCCGVRMSKAYQPGDSK
VSTANGCANDDDAEEEGPEPSWLECDDETVRVLTPQQLEDILAPKQSKNSSLTPYLLFYS
RIP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacaattatttcagacaaaacctctgcttctgaaactaacggtcctccccctaggaaa
aagatttgtctctcattgtctggaaaagggaagacaaaaccgtctgttactgttgcggag
gcagattcaccctctgagatgagtgtgacagtgaatagaggcgacttaaataagagaaga
gtcgtccgtgtgagaaaagatgctctagaaccaggcatgatgctgaatgggtttgttcca
gattctgtgaactcaattgctgcaagtgatgacagccctggtagtgatgttccacctgtt
gcaaccatctgcaatttggggaacacatgttttttgaacagtattttgtacacacttcgt
tttgcaccttatttcttacacaaacttcaccatcttgtcaacgatcttgcagatgtggct
gcacgaaataatgctaaagtgaaatcctcatcattagggagaagcataggcctaagccgg
aagtattattgggacatggaacaaatgagagcatctggtgaaaactgtgctaaaaaaagg
gttcagattgtgactgaaaaacttcatgaggtatatgagtcacttcatagcgctgaactg
aaagaaagcactgaaccttttcagcctgaaatatttttacgtgctcttagagaggtgaat
cctatttttgaaggaaaccaacaacatgatgctcatgaactgcttggctgccttttgaat
tatatgcgtgaaacttgccaggaacttaccaaacagttagagactcatcctaatccagca
gagctgtgtaatggcgcttcaagttgcgaggatgtgaaaaaggaaaccaaaggttctctt
ctggctcatgtgggcctttcttcatctacatcaagtattgtaagtggtggaaaatgggga
atgagaaaatcatggaagcggaaaaagccacttggtgagaatatcctcaaaactaaccgt
tctaccaagaatgggagtcaaacatctgtgataaacaacggcaactctgcacctcattca
agtaatggagattcaacttcaaatattgagaatgctccaaatgagcccagaatattggtt
aatggagaagttcatgatacaactgatgtggataacaccaataaagaaaatgggtcctgt
actttaagacctttgcaagaaggagatgaaggagaaacaactgatgataaaactaggctt
aactttattgaagaggattttgagggtgtatcagttctttgtacaaggtgtctagaatgt
gaatgtgtgacagaaagaaaagaagctttctatgaaattggagtacctattgcatctgat
caagatcctgagaaaagagaagattctgatcaaatatcagtactgtatagatcatctata
gtcacagaagaattacttcaaagtgcaaataagtattggtgcgaacattgcttacgatac
aacgaagcaaggaggtcggtgcgttatgaatcactaccgccacttcttatcttacatttg
aagaggttctcatctacatttggatctatggtttgtatgtcaaaagtgaatgactacatg
ccaacgccacttgtattagactgtttctgtgtggaatgcctcgaagcaacagcacaagaa
caaggcgtgaaacaccgctaccagctttatggagttatcatgcacctgggtgctacaata
gcatcaggacactatgttgcatacgttcgtgctgctgatcctattgctgattaccgctca
tgtgacaaagagaaaaggaaaactgccagccttattgctacaaacaccaccaaaggacca
agccaacctgatggggaaaaagcccgaggtttgctcagatttttctccaaaagcaagtca
agtaactctgataatgtgtcaacgaatcacctaacaaattcccaatatagaaacacatgt
aggagtttggattgttgtggggtccgtatgagtaaagcatatcaaccaggggattccaaa
gttagtactgccaatgggtgtgcaaatgatgatgatgctgaggaagaagggccagaacca
tcatggttggaatgtgatgatgaaactgtgagggttctcaccccacaacagctagaagac
attttagcgcctaaacaatcaaaaaattcatcactcactccctatttgctattttattcg
cgtattccttga
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