Francisella opportunistica: CGC45_04840
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Entry
CGC45_04840 CDS
T06355
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
foo
Francisella opportunistica
Brite
KEGG Orthology (KO) [BR:
foo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
foo03016
]
CGC45_04840
Enzymes [BR:
foo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CGC45_04840
Transfer RNA biogenesis [BR:
foo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CGC45_04840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Lipoprotein_3
Motif
Other DBs
NCBI-ProteinID:
AXH33997
UniProt:
A0A345JTR1
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All DBs
Position
985837..986931
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AA seq
364 aa
AA seq
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MIINTNKQLNDVIATLRNTSQLAIDTEFYWMRTYYPELCLLQIATENEIFLIDTLKELDF
SKLKDIFAAKDIQKIIHSATNDIPIIKRFFNCEVNNIFDTQLAAAFLGFQTQSSLKTLLK
EILDIEMEKESQFSDWRNRPLSQKQLDYAIKDVKYLIQLKEFLQQQLAKSQYQDFFEQEL
VEIQKAQFNSIESIYNKIGNIQKFDEKTQKNAILIAQWREMIAQEKNIPVRFIFNNKILY
IIAHTNPKSLNSFDHDELKRLKPWIKKGVITALSSTKSLDQVILEQKSGSKLAAELNDKI
VAFFDIQAKQFKFDSSIIASRKDIRSLAYNLSIDTNYTNNKLLAGWRYKIVGKKLKEYIL
DSIK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgataattaatacaaacaagcaattaaatgatgttatagcaactcttagaaatacatca
cagctagctatagatactgagttctattggatgcgcacatactatcctgaactttgtctg
ctacagatagccactgaaaatgagatatttttaatagatacactcaaggaactagatttt
agtaagttaaaagatatttttgcagctaaggatatccaaaaaataattcactccgcaacc
aatgatatccctattatcaaaaggttttttaactgtgaggttaataatatttttgatacc
caacttgcagcagcctttcttggatttcaaacacaatcatcgctaaaaactcttttaaaa
gaaattttagatattgaaatggaaaaagaatctcagttttcagattggcgcaatagacct
ttatcacaaaagcaacttgactatgctatcaaagatgttaaatacctcatacaattaaaa
gagtttttgcagcaacaactagctaaaagtcaatatcaagatttttttgagcaggaacta
gttgaaatacaaaaagcacaatttaactctattgaaagtatttataacaaaataggtaat
atccaaaaatttgatgaaaaaacgcaaaaaaatgctattttaatagcacaatggcgagaa
atgattgctcaagaaaaaaatattcccgtaaggtttatttttaacaataaaatcttatac
attattgctcatacaaaccctaaatctcttaactcttttgatcatgatgagctaaaaaga
ttaaaaccttggattaaaaaaggtgttattaccgcgcttagctcaactaaaagcttggac
caagtaatactagagcaaaaaagtggtagtaagttagctgcagaactaaatgataagata
gttgctttttttgatattcaggccaaacaatttaaatttgattctagtataatcgcctca
agaaaagatattcgctcactagcatataatctaagtattgatactaactacacaaataat
aaactccttgctggttggagatataaaatagttggtaaaaaattaaaagagtatatactt
gatagcataaaataa
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